| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1977 |
|---|
| Symbol | |
|---|
| ID | 2741540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1990218 |
|---|
| End bp | 1991408 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637160867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972580 |
|---|
| Protein GI | 42527482 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAATTTA TTCATAATGC CATTATGCTT AACGATGACG CTTTAATTTT AAAAACAGGA
AATTGGGAGC CTCAAAATAA AAAGAGGCTT GAAAAACTGA TAAGAGAAAA GGCCTTTAAC
GGAAATTATG CCGTTTTTGA CTGGGATTTT ACTTCAATTT TTTATGACAC GCAGGATAAT
CTTTTTGTGT ACCAAATTGA AAATCTTTGT TTTAATTTAA ACCCCGAAGA ATTTAATCAA
ACCATAAGGG CGGGAATTCC TCAAGATGAG ATTTTGCCCC ATACAATAAA CCTTGAAGGC
AGAGCCTTAA CTGCCGGAGA ACTTTCCGAC GATCTAAACG AACGCTACGA GTTTCTATAT
AAAAATTATT TGGGTTTTAG CGGAAAAATG AGCCTTGCAG AAATTACATT GACCGAAGAG
TTTATAGATT TTAGAGCTAA GATGCTTGTT TTAATGCGGG GAGCAGCCTC CCTTTGCGGT
GTGGACATCG GCCAATCCGT AAGCACAGGC ATGACGATAG AAGAACTTTC GGTCCTTACC
GAAAAGGCAA TAGATCAAGG CCTAAAAGAC GAAATAAAAA CTTATAGAGT AAGATCTTCA
TCAGTTTTAA AAGGAAGATC CGGAGAAGTA GAGGGCGGCT ATAGAAAGGG CTTACGCGTT
CAAGAAGAAA TGCAAGACTT GTTTTCGGCT TTAAGGAAAA ACGGAATCGA AGTCTATATT
TGCTCAGCCT CCCAAGAAGA CAATGTCCGC GTTTTTGCAT CCAACCCAAA ATATGGATAT
AGGCTGGACA GTAAAAACGT TTTCGGAAGA AGAAGGCTCC TTGATGAAAA TAAAAAGCTT
ACCGTTATAG ACAACACCTC GATTCCTGCA ACAAGAAAAG AAGGAAAGGC CGAAGCAATA
AAAAAAGTCC TTGCCCCGAA ACACCAAAAC AAGGCTCCCG TTTTAATAGC AGGCGACGGC
GACGGCGATT TTTACATGAT GGATGCTTTT AAAGACGAGG CCTTGATCCT AATCTTTAAC
AGAAGCCCCA AAAAAGAAGC TAAAATATAT CCCCTTTTAA TGAGCGGAAT TAAAGAAAGA
GAAAATCCTG ATGCTCGGAT AATTGTTCAG CACAGAAATA ATCAAAAAGG ATGTTTTATC
TCAAAGGCCC CGGAAGAAGA AAAACCTCTG GACAGCCTGC CTGAAAAGTA A
|
|---|
| Protein sequence | MQFIHNAIML NDDALILKTG NWEPQNKKRL EKLIREKAFN GNYAVFDWDF TSIFYDTQDN
LFVYQIENLC FNLNPEEFNQ TIRAGIPQDE ILPHTINLEG RALTAGELSD DLNERYEFLY
KNYLGFSGKM SLAEITLTEE FIDFRAKMLV LMRGAASLCG VDIGQSVSTG MTIEELSVLT
EKAIDQGLKD EIKTYRVRSS SVLKGRSGEV EGGYRKGLRV QEEMQDLFSA LRKNGIEVYI
CSASQEDNVR VFASNPKYGY RLDSKNVFGR RRLLDENKKL TVIDNTSIPA TRKEGKAEAI
KKVLAPKHQN KAPVLIAGDG DGDFYMMDAF KDEALILIFN RSPKKEAKIY PLLMSGIKER
ENPDARIIVQ HRNNQKGCFI SKAPEEEKPL DSLPEK
|
|---|
| |