| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1970 |
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| Symbol | |
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| ID | 2741533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1984587 |
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| End bp | 1985834 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637160860 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_972573 |
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| Protein GI | 42527475 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.645732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGT TTATGAGAAG GGGAATACAA AAATCCCCAA ACATGAATGA AGCTCAACTG
CGTACCTTTG TAAAGCTGCT TGCAAACGAG TATTCTCTAT TGGATTCAGT AATGGATTCT
TTAAATGACG GTGTTATAGT TGCAGATTCC GAAAATAAGA TTATAAAATC GAATAGGGCT
GCAGAAAGAA TTTTAGGCAC CTCTTTTAGA GGAACCTCTC TTAGAAGCAC TTCACTTGGC
GGTTCCGCTT TAGGAGAAGG CCATGAAAAA AATGTCTGGG AACATATAAA GATTCAGGAT
ATTGCCGACT TTGTTTCTTC GGTTATTCAA AATGAAAGCG GACAAACTTC AAAAGAGTTT
AACCTCAAAG CCGATAAGCC TGAAGGTAAA AATAAATATA TTGAAGTTTC GGTTCTTCCC
TTGGTAAACG AAAAGAAAAT TCAAGGTACG ATAATTATGA TTGCGGATAT TACCGAAAAA
AGAATTGAAG AAATTAAAAA CCGCCGCCTT GAAAATCTTG CAAGCCTTAC AAATGTTGCA
GCTGCCGTTG CTCACGAAAT AAAAAATCCT CTTGCGGCAA TCAGCATTCA TTTACAGCTT
TTAAAGAAAA ATTTTACGGC TTGTAATTTA TCCATAAACC AAAAGGCTCA AAAACATATA
GGCGTTATCG AAGAAGAAAT TGAAAGGCTC AATAAAATCG TGGTGGATTT TTTGTTTGCC
GTGCGTCCCT TAAAATTCGA ATTTGTTCCC GTAGATATAA ATGCCCTTTT AAAGAATTTG
TACGATACTT TTTTTGACGA GTTTAATGAC AGCGGTATAG CTATTTCTCT TAGCTTTTCA
AAGGAGCTTC CTAAGATTCA AGGCGATGAA AGATTTTTGC GGCAGGCATT TATGAATGTC
CTAACAAATG CAAAATCCGC AATGCCTAAT GGAGGCTTTT TGGATATATC GACAAAGGCT
GTAAACGATT TTATTATTGT AACTATTTCG GATTCAGGGC AGGGTATCTT ACCCGAGGAT
ATGCATAAAA TATTTGAGCC TTATTTTACG ACAAAACATG ACGGAACGGG TTTGGGGCTG
ACCATGACAT ATAAGGTTAT AAAAGAACAT GGAGGAGACA TAAACGTTTA TTCGGATTAC
GGCATGGGAA CAAGTTTTAA ATTTTCTCTT CCGATAGAGC GTAAGGGTGC AATGCTTTTA
CTCTCCGATA AAACTTTCGA TTTTGATTCG GTAAAGGATA TAAAATGA
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| Protein sequence | MREFMRRGIQ KSPNMNEAQL RTFVKLLANE YSLLDSVMDS LNDGVIVADS ENKIIKSNRA
AERILGTSFR GTSLRSTSLG GSALGEGHEK NVWEHIKIQD IADFVSSVIQ NESGQTSKEF
NLKADKPEGK NKYIEVSVLP LVNEKKIQGT IIMIADITEK RIEEIKNRRL ENLASLTNVA
AAVAHEIKNP LAAISIHLQL LKKNFTACNL SINQKAQKHI GVIEEEIERL NKIVVDFLFA
VRPLKFEFVP VDINALLKNL YDTFFDEFND SGIAISLSFS KELPKIQGDE RFLRQAFMNV
LTNAKSAMPN GGFLDISTKA VNDFIIVTIS DSGQGILPED MHKIFEPYFT TKHDGTGLGL
TMTYKVIKEH GGDINVYSDY GMGTSFKFSL PIERKGAMLL LSDKTFDFDS VKDIK
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