| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1945 |
|---|
| Symbol | |
|---|
| ID | 2740185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1961209 |
|---|
| End bp | 1961535 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637160835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972548 |
|---|
| Protein GI | 42527450 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1416] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000150521 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTATA AGGTTTTGTT TAGGATTGAA AAGTTTAACT TAATAGATAA GCTAAAGCAT
AAGATAACAA ACTACAAAAG ATATTGTGAA GAATTGGGCG ATACTGCCGA GATTGAGGTT
GTTTTTGCCG GTGATGTTGT AAAATACTTT GAAAGTCTTG AAAACGATTT TACGGATTCG
GGACTAGACA TAGCCCTATG CCACAATGCT CTTACAGGAC AAAACATGCC CGATATAAAT
TATAAAAATA TTAGAACCGT CAGGGCCGGA ATAGGCGAAA TCATAAGCCG GAAAGCTGAA
GGTTTTATCG AATATACGAT AGAATAA
|
|---|
| Protein sequence | MHYKVLFRIE KFNLIDKLKH KITNYKRYCE ELGDTAEIEV VFAGDVVKYF ESLENDFTDS
GLDIALCHNA LTGQNMPDIN YKNIRTVRAG IGEIISRKAE GFIEYTIE
|
|---|
| |