Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1922 |
Symbol | |
ID | 2740420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1941003 |
End bp | 1941575 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637160808 |
Product | hypothetical protein |
Protein accession | NP_972525 |
Protein GI | 42527427 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.250359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGCAG AAAACGGTAA ATTATACGAT GTAGAAATGC AGGTAAGCAA TGAACTCAAT ATCCCTAAAC GTATGCGGTT TTACCAAGCT GCCATAGATA TTTCTTTTTT GGACAAAGGC AATTCCTATA ATAGCTTAAA CGACAGCTTT ATAATTTTTA TCTGTACCTT TGATGCCATA GGCAAAAATA GGCCTGTTTA TACCTTTGAA AATCTTTGTA TAGAGGACAA AAACACCCCT TTACAAGACG GCACACGAAA GGTTATAATA AATGCAGAGG GCTTTAATAA CACTGAGGAG AAAGAATTAA AAGAATTTTT AGAATACCTT AAAACAGGTA AGCCGAATAA TGAATTTACA ATGGAGATTG AAAAAATGAT ACAAACAGTA AAAAATAATG AACAGGCAAG GCAAGAATAC AGATTATTAT CTACTTTTGA AATGGATATT AAAGACAAAG CGGAGTACAG AGTAAAAAGA GAAACGGCTA AACTTATGAA ACAGCGAGGC TACCCAATTT CTGAAATTTT ATTAATGACA GGCCTACCTG AATCCGAAAT TGAAAAGCTG TAA
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Protein sequence | MQAENGKLYD VEMQVSNELN IPKRMRFYQA AIDISFLDKG NSYNSLNDSF IIFICTFDAI GKNRPVYTFE NLCIEDKNTP LQDGTRKVII NAEGFNNTEE KELKEFLEYL KTGKPNNEFT MEIEKMIQTV KNNEQARQEY RLLSTFEMDI KDKAEYRVKR ETAKLMKQRG YPISEILLMT GLPESEIEKL
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