Gene TDE1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1922 
Symbol 
ID2740420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1941003 
End bp1941575 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content34% 
IMG OID637160808 
Producthypothetical protein 
Protein accessionNP_972525 
Protein GI42527427 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.250359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGCAG AAAACGGTAA ATTATACGAT GTAGAAATGC AGGTAAGCAA TGAACTCAAT 
ATCCCTAAAC GTATGCGGTT TTACCAAGCT GCCATAGATA TTTCTTTTTT GGACAAAGGC
AATTCCTATA ATAGCTTAAA CGACAGCTTT ATAATTTTTA TCTGTACCTT TGATGCCATA
GGCAAAAATA GGCCTGTTTA TACCTTTGAA AATCTTTGTA TAGAGGACAA AAACACCCCT
TTACAAGACG GCACACGAAA GGTTATAATA AATGCAGAGG GCTTTAATAA CACTGAGGAG
AAAGAATTAA AAGAATTTTT AGAATACCTT AAAACAGGTA AGCCGAATAA TGAATTTACA
ATGGAGATTG AAAAAATGAT ACAAACAGTA AAAAATAATG AACAGGCAAG GCAAGAATAC
AGATTATTAT CTACTTTTGA AATGGATATT AAAGACAAAG CGGAGTACAG AGTAAAAAGA
GAAACGGCTA AACTTATGAA ACAGCGAGGC TACCCAATTT CTGAAATTTT ATTAATGACA
GGCCTACCTG AATCCGAAAT TGAAAAGCTG TAA
 
Protein sequence
MQAENGKLYD VEMQVSNELN IPKRMRFYQA AIDISFLDKG NSYNSLNDSF IIFICTFDAI 
GKNRPVYTFE NLCIEDKNTP LQDGTRKVII NAEGFNNTEE KELKEFLEYL KTGKPNNEFT
MEIEKMIQTV KNNEQARQEY RLLSTFEMDI KDKAEYRVKR ETAKLMKQRG YPISEILLMT
GLPESEIEKL