| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1904 |
|---|
| Symbol | |
|---|
| ID | 2740402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1923287 |
|---|
| End bp | 1923703 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637160790 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972507 |
|---|
| Protein GI | 42527409 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGTTA AGGTAATAAA CATAAATCAG CAAAATCAGC ATCCGATATT GAAACACTGT
CAAACAATGT GTGAGTATAG CGTATTTGTA AATACGGTAA GAAAATGGAA GGGTGTAGAT
ACTCAAAACG GCTTTCAAAA AGCGATTGAA GAGTGTATAG CAAATAATAT CTTGAAAGAT
TATCTCAAAC GTAAGACTAG GGAGGTATTA AATATGTTAC TAGCTGAATA TGATTATGAA
GCAGATATAG CAGTGCAAAG AGCCGAAGAA CGGGAAATAG CCTTCGCCGA AGGCGAAGAA
AGAGGCTCTT ACCAAAAAGC CATTGAAACG GCAAAACTTA TGTGTAGGCA TAATTATCCG
ATTGCCGAAA TTTGTACAAT GACAGGTCTC AGCCAAGAAG AAATTGAAAG CGTTTAA
|
|---|
| Protein sequence | MNVKVININQ QNQHPILKHC QTMCEYSVFV NTVRKWKGVD TQNGFQKAIE ECIANNILKD
YLKRKTREVL NMLLAEYDYE ADIAVQRAEE REIAFAEGEE RGSYQKAIET AKLMCRHNYP
IAEICTMTGL SQEEIESV
|
|---|
| |