Gene TDE1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1901 
Symbol 
ID2740399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1921531 
End bp1922379 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content34% 
IMG OID637160787 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_972504 
Protein GI42527406 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATA TTTTAAACAT AAAAGACTTA AACAAGAACT ATAAAACTTT TAGCCTTAAA 
AACATAAGCT TTCAAATCCC TCAAGGAACG GTTATGGGTT TTATAGGAGC AAACGGAGCA 
GGAAAAACCA CAACGATTAA GCTTATAATG CAGCTAATCA AAAAAGATTC GGGACTCATA 
GAAATTTTCG GTCAGTCTGC CGAAAAAAAC TTCAGCTCTT TAAAACAAAA GATAGGCTTT 
GTTTATGATG AACCCTGTTT TTATGAACAA TTAAAAATAA AAGACATGAC AAAGATTATC 
GCTTCATTTT ATAATTTCTG GGATTGGAAG GCTTACAAAA ATTATCTTTC GCAATTTAAG 
CTGGATGAAA CACAAAAAAT AATACAGCTG TCAAAGGGAA TGAAAACCAA ATATTCACTT 
GCCCTCGCCC TATCCCATAA TGCACAATTT ATAATTATGG ACGAACCATC AAGCGGTTTG 
GATCCGGTTA TAAGACGGGA ACTTTTGGAT ATTTTCTATG ATGTAATAAG TGACGGAAAA 
TGCAGCATCT TTTTTTCTAC CCATATTACA AGCGACTTGG AACGTATTGC AGACTATGTC 
ACATTTATCA AAAACGGAGA GGTAGTTTTT TCAAAGAGAA AGGACGATAT TTTTTCGGAA 
TATGCCTTGG TCAAGGGTGG GCTCGATGAG TTAAAAAGAG GAATAGAAAG TAAACTTATC 
GGAATACGCA AAACCGGAGT AGGTTTTGAA GCCCTCACAA AAGAAAAACA AGGTCTTCCT 
GCAAGCCTCA TAATCGAAAA ACCTGCTTTA GAAGACATTA TGTTTTTTTA TGAAAAAGCT 
TCAAATTAA
 
Protein sequence
MDYILNIKDL NKNYKTFSLK NISFQIPQGT VMGFIGANGA GKTTTIKLIM QLIKKDSGLI 
EIFGQSAEKN FSSLKQKIGF VYDEPCFYEQ LKIKDMTKII ASFYNFWDWK AYKNYLSQFK 
LDETQKIIQL SKGMKTKYSL ALALSHNAQF IIMDEPSSGL DPVIRRELLD IFYDVISDGK 
CSIFFSTHIT SDLERIADYV TFIKNGEVVF SKRKDDIFSE YALVKGGLDE LKRGIESKLI 
GIRKTGVGFE ALTKEKQGLP ASLIIEKPAL EDIMFFYEKA SN