Gene TDE1893 details

Gene Information

• Locus tag: TDE1893
• Symbol: lepA
• ID: 2739122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1912302
• End bp: 1914107
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637160779
• Product: GTP-binding protein LepA
• Protein accession: NP_972496
• Protein GI: 42527398
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000413124
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAATC CTGAAAATAT ACGCAATTTT TGTATTGTAG CTCACATAGA CCACGGTAAG 
TCTACCTTAT CCGATAGGCT TATCGAAAAG ACTAAGATAA TCGATGAGCG CTATCACCGC 
AATCAGATGA CCGATGATAT GGACATAGAG CGGGAGCGGG GCATTACCAT AAAAAGCCAT 
GCCGTCCGAA TTCCTTATAC GGCTAAGGAC GGTAAAAACT ATGTTTTAAA CTTTGTAGAT 
ACGCCCGGAC ACGTAGACTT TTCCTATGAG GTTTCGCGTG CCATAGCTTC TTGTGAGGGG 
GCCATCTTAA TTGTAGATGC CACTCAGGGC GTTGAATCCC AAACCCTTTC AAATATGTAT 
CTTGCCCTTG AGCATGACTT GGAAATTCTC CCCGTCATAA ACAAGATAGA TTTACCTGCG 
GCCGATATAG ATGCTGCAAA ACATCAGATA GACCATGACC TGGGACTTGA TTCCGATGCG 
GCTGTGGCCG TTTCTGCAAA GACAGGCGAA AATATCGATG CTCTTTTTGA AGCTATTATA 
ACAACCTTTC CGCCTCCCAA GGGTTCAAGG GATAATCCAT TACAGGCCCT TATCTTCGAT 
TGTCACTACG ACCCTTATCG GGGAGTTGTA GTCCATGTAC GTGTTTTTGA AGGAATGATA 
AAACCCGGAA TGACTATCCG CTTTATGAAT ACCGGAGGCG AATACAAGGT AGAAGAAACG 
GGAACCTTTG TCCTAGACCT TGTAAAGCAG GATTCATTGC AGGCCGGAGA AGTAGGCTAT 
ATAATTGCAG GCATTAAAAC CGTTTCGGAT GTAGGTGTAG GAGATACCAT CACCGATGCA 
GCCGCTCCGT GCAAGGCCCC ATTATCCGGT TTTAAAGAAG TAAAGCCCGT AGTTTTTTCT 
TCCGTCTATC CTACGGATAC AAACGATTAT GAGGAGCTCC GCGAATCTTT TGAAAAATTA 
AAACTGAACG ATGCAAGTTT AACGTGGGAA AAGGACTCTT CCCTTGCCCT CGGCCACGGT 
TTTAGGTGCG GCTTTTTGGG CCTTCTTCAT CTTGAAATCG TACAAGAAAG GTTGGAAAGA 
GAATTCGATC AGTCGGTTAT TTTTACGGCT CCCTCGGTAC GCTATAAACT TACCATGCGT 
ACGGGAGAAG AAATTATTTG CGATAACCCT GCCGATTATC CCGACGAGGG ACTTATAGCC 
TCGGCTGAAG AGCCCTATAT AAAGGCAACG CTTATAACGC CTACAAATTA TCTTGGAAAT 
GTTATGTCCC TCTGTATGGA AAAGAGGGGA GTGCAGACCA ATATGACTTA CTTGGACGAA 
AAAAGGGTTG AAATGACCTA CGAGATGCCC TTAGCCGAGG TCTTGTTTGA TTTTTATGAC 
AGGCTTAAAA GCATAAGCCG CGGTTATGCT TCATTTGATT ATGAGGTTAT AGAAACCCGT 
CCTACCGATT TGGCAAAGAT AGATATTTTA ATTAACGGAA AGCCGGTTGA CGCCCTCGCC 
CAGCTTGCAT ATAAACCGAG CGCCTATGAC AAGGCTCGTC TTGTCTGCGA AAAACTTAAA 
GACGAAATTC CGCGTCAACA GTTTAAGATA CCGATTCAGG GAGCTATCGG AAGTCAGATA 
ATAGCCAGAG AGACAATTTC GGCCTTGCGT AAGGATGTTC TTGCCAAATG TTACGGAGGT 
GACATCACCC GAAAGCGAAA ACTTCTCGAA AAGCAAAAGG AAGGAAAAAA GCGCATGAAG 
ATGATAGGCG ATGTAGAGCT CCCGCAGTCC GCATTCTTAG CAGTATTGAA GACTAAGGAA 
GATTAA 

 

Protein sequence

MLNPENIRNF CIVAHIDHGK STLSDRLIEK TKIIDERYHR NQMTDDMDIE RERGITIKSH 
AVRIPYTAKD GKNYVLNFVD TPGHVDFSYE VSRAIASCEG AILIVDATQG VESQTLSNMY 
LALEHDLEIL PVINKIDLPA ADIDAAKHQI DHDLGLDSDA AVAVSAKTGE NIDALFEAII 
TTFPPPKGSR DNPLQALIFD CHYDPYRGVV VHVRVFEGMI KPGMTIRFMN TGGEYKVEET 
GTFVLDLVKQ DSLQAGEVGY IIAGIKTVSD VGVGDTITDA AAPCKAPLSG FKEVKPVVFS 
SVYPTDTNDY EELRESFEKL KLNDASLTWE KDSSLALGHG FRCGFLGLLH LEIVQERLER 
EFDQSVIFTA PSVRYKLTMR TGEEIICDNP ADYPDEGLIA SAEEPYIKAT LITPTNYLGN 
VMSLCMEKRG VQTNMTYLDE KRVEMTYEMP LAEVLFDFYD RLKSISRGYA SFDYEVIETR 
PTDLAKIDIL INGKPVDALA QLAYKPSAYD KARLVCEKLK DEIPRQQFKI PIQGAIGSQI 
IARETISALR KDVLAKCYGG DITRKRKLLE KQKEGKKRMK MIGDVELPQS AFLAVLKTKE 
D