| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1888 |
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| Symbol | |
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| ID | 2739117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1909213 |
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| End bp | 1909590 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160774 |
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| Product | hypothetical protein |
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| Protein accession | NP_972491 |
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| Protein GI | 42527393 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000131762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAGA TAGAAAAAGT TAATTTATTG GATTTGGATG AAGAAGATTA CGATACGGTT
TTAGCTCCTG ATATTCAGTT TAGCGGTAAG ATAGAGTGTA AAAAACCGTT TATGATTAAG
GGGCATGTGG AGGGCTTTTT GGTTTCCACA AGCGATGTAA CCGTTGATGA AAATTCTGTT
GTTAAGGCCA ATATCAGGGC TGACAGGGTT GTGATCAAGG GGGCGGTTGA AGGTAATGTT
TTGGCCGATA CTATGGTGCA TGTTTTTTCT TGCGGAAAAC TGATAGGCGA TGTTACGGCT
CCGGAAGTCG TTCTTGAAAG TGGCTGCGTA TTTAACGGTA TTTGTACCAT GACAAAGGAT
AAGCAATTTG GAAGATAA
|
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| Protein sequence | MAEIEKVNLL DLDEEDYDTV LAPDIQFSGK IECKKPFMIK GHVEGFLVST SDVTVDENSV
VKANIRADRV VIKGAVEGNV LADTMVHVFS CGKLIGDVTA PEVVLESGCV FNGICTMTKD
KQFGR
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