Gene TDE1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1873 
Symbol 
ID2740062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1894819 
End bp1895685 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content20% 
IMG OID637160760 
Producthypothetical protein 
Protein accessionNP_972477 
Protein GI42527379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000278939 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAGTAATAAA AGATCTGTGC ATTCTTTTTA TGCTGTATAT TCTTGTTTTT 
TATATAAATT CGTATATTCA TAAGTTTTTA TTAAATAATT TTTATAATTG CTATTATGCT
TTATTCGGTA AATATAATAA AATTGTTGAC CTTCTAATAT CTTTACTATT TATAATTGTT
TTATATTTAT TGTATCTAAA AGAAATGAAG ATAATATTTA CTTATAAAAA ATTAAATTTC
TTTTTTATTG TAAAAAGTTT GATTTATATA TTATCAATTG GAATGATATA TTATATAATA
TACTTTATCT TTGATAATGC TTTTCTTTTT AATTTTTTTA AATACTTTAA TGATATTTTA
AGTGGCAAAA AAAATATTAC TATATATGAT ATTCTGATTT TAGAAAAATC GCTAAGGCCT
TGTTTTGAAC CTTTTATGTT TATAGCTACA GTAATTATCA GTCCTATTTT TGAAGAAATA
CTATATAGAG GGCTTATGTA TAATAAATTA AAAGAAATAA GTAATGCCTT TATTGGTGTA
CTTATTTCTT CAATACTTTT TGCTCTTTTA CACATACCAA AGTACGGTTT TGGAATAAAT
ACATTCTTTT TATTTTTAGT AGGAATTTTA TTGGCTTATT GTTATGAAAA AAGCAATAAT
ATTTATGTTC CTATTTTTGT TCATTCAATT AATAATTTTT TTATATTTTT ATTTAACTAT
GTATATTTTT ATTTTTTAAT AATTATTTAT TTTATAATTT TTATTGCCGG TATAATAATA
GCTATACAAG AAATAAAAAA ACACCTAAAA GCGCGGAAAA CTTTTAATCT TGTACAATCG
GCTTCTCTAT CGGAGAGTGA AAAATAA
 
Protein sequence
MNKKVIKDLC ILFMLYILVF YINSYIHKFL LNNFYNCYYA LFGKYNKIVD LLISLLFIIV 
LYLLYLKEMK IIFTYKKLNF FFIVKSLIYI LSIGMIYYII YFIFDNAFLF NFFKYFNDIL
SGKKNITIYD ILILEKSLRP CFEPFMFIAT VIISPIFEEI LYRGLMYNKL KEISNAFIGV
LISSILFALL HIPKYGFGIN TFFLFLVGIL LAYCYEKSNN IYVPIFVHSI NNFFIFLFNY
VYFYFLIIIY FIIFIAGIII AIQEIKKHLK ARKTFNLVQS ASLSESEK