Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1870 |
Symbol | |
ID | 2740059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1892746 |
End bp | 1893582 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 637160757 |
Product | CAAX amino terminal protease family protein |
Protein accession | NP_972474 |
Protein GI | 42527376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000233024 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACA ATATTAAAAA AGCCTTTTTA AATTTTTGGT GGCTTTCAAG CATACTCTTA TTTTTAATAC TTTGGAAACT TGTGCAAATA TTAAATCCTG ATATGTCTAT ACCGGATTTA AAAAAAAGAT ATTTGTATGG AATAATAGTT ATTGTAGATT TGTATTGGGT TGTTTTTTGT TTTAAAATAA ACAGTATTAA TGTTAAAGAA TATTTTAAAT TTAAAAATCC TAAGTTTCTT TTAATTTTAA AATATACTTT GATTGTTTTT GCAATAAGTG CAATTTATTA TCAGTTTAAT ACACTTATTC TGGATATAAA ATATTCTTTT AATTTTTTCC AAGAAAACAT GGGGAAAATA TCCTATTACG ATGTTTTTAG AAATCCGAAT TTGTGGAAGT ATGTTCTTAT TTGTGGAATG ATATTTGCAC CTGTAGCGGA AGAATTGTTT TTCAGATATT ATATGTATAA TAATTTAAAG TATAAATATT CGAGTGTCTT TATAGCTAAT ATTATTTCAA GTGTAATATT CGGCTTTTTT CATATTAGTA TGTATGGATA TGATCTTAAT GCTGTTATGA TGATAAGTAT AGGCGGTATG GCTCTTGCAT ACTGTTATGA AAAAACAAGA ACCATTTGGA CACCGATGAT TATGCATTCC CTTCATAACG GTCTTGTATC TTTTGGACAA TGTTTAACTA CCCCTTTTTT TACTATATTG ACACTTATTT ATATAATTTT AGGCGGCAGT ATTGGAATAA TTGAACTTAT CAAACATCTA AGAAGGAGAA AACAAAATGC AATACAAACT GATACCTTAC CTCATGTACA AGAATGA
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Protein sequence | MNNNIKKAFL NFWWLSSILL FLILWKLVQI LNPDMSIPDL KKRYLYGIIV IVDLYWVVFC FKINSINVKE YFKFKNPKFL LILKYTLIVF AISAIYYQFN TLILDIKYSF NFFQENMGKI SYYDVFRNPN LWKYVLICGM IFAPVAEELF FRYYMYNNLK YKYSSVFIAN IISSVIFGFF HISMYGYDLN AVMMISIGGM ALAYCYEKTR TIWTPMIMHS LHNGLVSFGQ CLTTPFFTIL TLIYIILGGS IGIIELIKHL RRRKQNAIQT DTLPHVQE
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