| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1850 |
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| Symbol | |
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| ID | 2740039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1878317 |
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| End bp | 1879651 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637160737 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | NP_972454 |
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| Protein GI | 42527356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAT TAAAAATAGC ATTTAGAAAT TTAAACAGAC AAAAAAGGCG AAGTATTCTT
TTGGTTTTTG CGATAGCCTT TGCTTTCTTT GTCGTTATCT TTATGGACGG CATGACTTCC
GGTGCCGTAA ACAGTATGGC CGGAGAAATT TCAAAAATCG TAGGAGGCCA TGTCTATATA
ATAGGTTCAA AAAAGGCTCC CGATAAGTCG GCGGATGATC CTGCTCAAAT TTATATGGAC
AAAAACGATG TTGAGTTTAT AGAAAAGACC GTAAAAGAAT TAGGAATAGA AACTACGTAC
ATCATAAAAA GAAGTCGTGC ATCAGGTAAG CTGATATTTG AAGGAAAAGA AGTTACCTCT
CAAATTGACG GCTGCAAATT CGATGAAGAA AAAATTTTAC ATGACAGTAT TCTTTTTAAG
GAAGGAAGCT GGGAAGCCAT GAAAAAAGAA AATGCAATTC TTCTTTCCGA ATCGGTAGCC
GCAACCTTAA ATGTAGACTT GCACGATATA GTTTTACTTG AAACTAGGAC ATCACAAGGT
CAGCTTACGG TTATTGAACT TCAAGTAGAA GGTATTGCAG TAAATCGCTC TTCATTCGGC
GGAATCACAA ATTACATCAA TTTTGATTAT TTGCAAAAAA TTACGGAATT GGAAAAAGAC
AGTATAGAAG TATATTCGCT TTTTTTAAAA AATCCCGATA TGCAGGAAAT TTATGCGCAA
CAGCTTGAAA GAAAAATCGC AGAAACTCAT CCCATTACAA GCAGGGATCT TGCCCGAACT
ATAAGCCCTT CACAGCCTGC AAGCAATGTA TTTAAGCAAC TTGAAGAAGG AAAGTGGCAG
GGAACCAAAT TCGGCATAGC TACTTTTTAC GATTTTGCTC CGCAGGTTAT TACCTTTATG
AATACCTTAA ACGGTATAAG TTTCGGTATT TTGATTGTGC TTTTGGTTAT TACGATGATA
GGTATTTCAA ATACCTTTAA AATTATTGTG TATGAAAGAA GGGGGGAAGT CGGAACCATG
CGCTCTTGCG GTGTTATGAG AAAACATATA AGGCGTCTTT TTCTTGCAGA AGCTTCATTT
TTATCCTTAT TCGGAGCCGT ATGCGGTTTT GTACTTGCTG TTCTTGTAAT GCAGGTTATC
TCGTTTATTC CGATAGCTGT AGATTCACCT TTTTCGGTCT TTACCAAAAA CGGATACTTT
GCGTGGAACT TATCCGCTCT TTTAGTTTTT TTAAAGTTTG TGATAATGTT GGGTTTAACC
CTGCTTACTG TAAGGGGCTC GGCTTCGAGA GCCGCTAATA TGATTCCTGC CGAAGCCTTA
AGGTCGGGAA AATAA
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| Protein sequence | MNILKIAFRN LNRQKRRSIL LVFAIAFAFF VVIFMDGMTS GAVNSMAGEI SKIVGGHVYI
IGSKKAPDKS ADDPAQIYMD KNDVEFIEKT VKELGIETTY IIKRSRASGK LIFEGKEVTS
QIDGCKFDEE KILHDSILFK EGSWEAMKKE NAILLSESVA ATLNVDLHDI VLLETRTSQG
QLTVIELQVE GIAVNRSSFG GITNYINFDY LQKITELEKD SIEVYSLFLK NPDMQEIYAQ
QLERKIAETH PITSRDLART ISPSQPASNV FKQLEEGKWQ GTKFGIATFY DFAPQVITFM
NTLNGISFGI LIVLLVITMI GISNTFKIIV YERRGEVGTM RSCGVMRKHI RRLFLAEASF
LSLFGAVCGF VLAVLVMQVI SFIPIAVDSP FSVFTKNGYF AWNLSALLVF LKFVIMLGLT
LLTVRGSASR AANMIPAEAL RSGK
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