| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1813 |
|---|
| Symbol | |
|---|
| ID | 2739243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1847953 |
|---|
| End bp | 1848339 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637160700 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972417 |
|---|
| Protein GI | 42527319 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00486059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACAAT ATAATATGGA TAAAGAAAAT TGCTTGATAT ATGAAGGTGT TTTTTTTAGA
ATTGAATGGT TTTATGATAA AGCAGGATAT AGTCAAGCAT TTGAATACTT TAGAAAAGCA
TCACCTTCTC AAAAACGAAA ATTTCTTATG TTGGTAAAGA AAATAGGTGA TTTCGGTAAA
ATATTTGATA AAACAAAATT CAGATATGAA GGAGATGAAA TTTATGCATT TAAACCTCAG
CCTGATAGAT ATTTATGTTT TTTTAAGAAA GGACAGAAAA TAATTGTAAC AAATGGATTT
TGTAAAAGAA GGAATAAACT GCCGTTGGCA GAAAAGACAA TCGCTTTAGA AAATAAAAAA
ATATATGAAC ATTTATATGA GGAGTGA
|
|---|
| Protein sequence | MVQYNMDKEN CLIYEGVFFR IEWFYDKAGY SQAFEYFRKA SPSQKRKFLM LVKKIGDFGK
IFDKTKFRYE GDEIYAFKPQ PDRYLCFFKK GQKIIVTNGF CKRRNKLPLA EKTIALENKK
IYEHLYEE
|
|---|
| |