| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1803 |
|---|
| Symbol | |
|---|
| ID | 2739233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1838485 |
|---|
| End bp | 1839360 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637160690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972407 |
|---|
| Protein GI | 42527309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATT ATGAGAATAG AATAGTTGCA TTCATTGATA TCCTTGGTTT TAAAGATTTG
ATAAAGAAAT CTGAAAATAA TCCTTATCAA ATTAATGAAT TACTAGAAAT ACTAAAATAT
ATCAAAGCAT GGGATACACA AGGGCAAAAT AAATGGGATA CTAATGTTAT TGCTGTTGAA
GAAGATGCAC AAACAAAAGG TTTAGAAAAA TTCGATATTT CTGGGATAAC AGCATGTACC
TGTTTTTCTG ATTCAATAGT TGTGTCTGTT CAATGTGAAA ATGAATTAAT TAATGAAAAA
GCATCAACAC TTATTGGAAA TCTATCAAAG ATTGGAGCAA AGCTCCTCCA AGCTGGAATA
TTAATTCGAG GAGCAATGAC TGTTGGAAAT TTAATACATA CTAATGATGG GATCATCATG
GGACCTGCAA TAATCGAAGC ATACTTATTG GAATCAAATT ATGCAAAAAA TCCAAGGATT
ATTCTATCGG ACAAATTAAT CGGAAAATTG AATTATCCTT TAAAAAGAAA AAGCGATAGA
TATCCATACC ATCAATACAT TAATCGCTTT AAAGATGGAT GTGCTGGATT TCATCAAATG
CAATTTTTCC AAGTAATGCA ATCTGAAGTA AATGAACAGA ATAAGCTAAA ATACGATCTT
GATGTAATTA GAAAGCGATT GATTGATGGA CTAGATATGT CTTTTTCAAA ACCAGAAGTA
TTTCTTAAAT ACCAATGGCT TATGAATCAG TATAATGAAC TAGTTATAAA TGAAGATAAT
GTTAAAAAAC CTATTTATGA TGTAAATTTA GCAGATAGTC ATTTAAATAT ACATTATTCA
CCAATTGATC AAGTAAGAAA TAAAGAAGAT ACCTAA
|
|---|
| Protein sequence | MENYENRIVA FIDILGFKDL IKKSENNPYQ INELLEILKY IKAWDTQGQN KWDTNVIAVE
EDAQTKGLEK FDISGITACT CFSDSIVVSV QCENELINEK ASTLIGNLSK IGAKLLQAGI
LIRGAMTVGN LIHTNDGIIM GPAIIEAYLL ESNYAKNPRI ILSDKLIGKL NYPLKRKSDR
YPYHQYINRF KDGCAGFHQM QFFQVMQSEV NEQNKLKYDL DVIRKRLIDG LDMSFSKPEV
FLKYQWLMNQ YNELVINEDN VKKPIYDVNL ADSHLNIHYS PIDQVRNKED T
|
|---|
| |