| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1796 |
|---|
| Symbol | |
|---|
| ID | 2739226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1834856 |
|---|
| End bp | 1835605 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637160683 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972400 |
|---|
| Protein GI | 42527302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.193183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA GAAATGAATC TAAGATTGAA ATTATAAAAC TTTCTATGAT TCTATTTACA
ATTATTATAT CATTAATTGT TTTATCAAAG ACATTTTTGG AAAGAAATAA AGAGAGTGAA
GTAATCCAAG TAACAGGTTT GGGAACAAAA GATTTTGAAT CTGATTTGAT TGTATGGTCT
GGTTCATTTT CACAGACTGA TATTGATTTA AAAAATGCGT ATGAGCGATT GCAGCTTGAT
CAAAATAAAA TAATAGACTT TCTAAAAAAG CGAAATGTGT CAACAAATGA ATATTTATTT
TCAGCAGTAG TAATTGATAA GGAATATGAA ACAATATATG ACATGGATAA AAACCAAAAA
CGTCTTTTTA AGGGATATCG CTTAATGCAA GATATAAAGA TTGAATCAAA CGAAGTAGAG
AAAATAGAAA CTATTTCACG AGAAATTACA GAGTTAATCA ATATGGGGGT TGAATTCTAT
TCATCTAAAC CACAATATTA TTATACGAAA CTGACTGAAT TGAAAAAAGA ATTAATTGAA
TATGCAACTG AAAATGCAAA AACTAGAGCA GAAACAATAG CGAGTAAATC AGGATTTAAA
CTAGGACGAT TGAAGAATGC AAATATGGGT GTATTTCAAA TAATAGCTAG AAATTCAAAT
GAAGATTATT CTTGGGAGGG AACTTTTAAT ACTACATCAA AACAAAAGAC CGCAACAATA
ACAATGAAAT TACAATTTGG AATACAATAG
|
|---|
| Protein sequence | MEIRNESKIE IIKLSMILFT IIISLIVLSK TFLERNKESE VIQVTGLGTK DFESDLIVWS
GSFSQTDIDL KNAYERLQLD QNKIIDFLKK RNVSTNEYLF SAVVIDKEYE TIYDMDKNQK
RLFKGYRLMQ DIKIESNEVE KIETISREIT ELINMGVEFY SSKPQYYYTK LTELKKELIE
YATENAKTRA ETIASKSGFK LGRLKNANMG VFQIIARNSN EDYSWEGTFN TTSKQKTATI
TMKLQFGIQ
|
|---|
| |