Gene TDE1781 details

Gene Information

• Locus tag: TDE1781
• ID: 2741225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1822568
• End bp: 1823350
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 21%
• IMG OID: 637160668
• Product: hypothetical protein
• Protein accession: NP_972385
• Protein GI: 42527287

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000171655
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA AAATTATTCA GTTAGAAACA AATTATTTGT ATTATTTATC TGGTGTAAGC 
AGAAATCCTA GAATTGATAT TACAAAAGTT AAGTCTACTT TAGAAAATTT TACAGTCGTT 
ATTTCTCCAT GGACATTTGT CGAGTTAATA ACAACTCAAG ATTTTACAAA TGAACAGAAG 
AAAATTATTG TCAAATATAT CATAAATAAT CAAATTGGAG TTCAAACATT TATTGAAAAT 
GGAAAGTATT ATGATTTTAG TCGGCTTATA AATGATTATT GCTATTTTTT ATTTTCTGAA 
CCTAATAAGT TAAATACTTT TCTAAAAAGA GTTATGAAAT TAAAGAAAGA CGAAGAAGTT 
AAGATCTTAA ATTTTTATAT TATTTTTATT ACATCGTTTA TTTATTATCT TTTTTATAAT 
AAATTAGAAA AATTAAATAT TAATAAAAAT AAGAAAAAAT GTTTTACATT TTGTGTGTTT 
TATTTATTGG AAGCTAATAA TTCTTTTATA AATAGAATAA TAAAAAAAAT AATAAATTCA 
CATTATGTTG ATTTTGAAGA AAATAAAACA AAAAAATCAT TGACAGAGCT AATAGGAGAG 
TATGGATACT TAATTTCTGT TATTTATGAT AAAGTTATTG AAGGTTCTAT TCATAAACTT 
TATCCTGGAT TTTTTGAACG GATTTATGCT TTTAATGATT TAACCGTAAA TGATGGAGCG 
AGTTCCACTA GTAAACAGTT TATACGACTT TTAAATAAAT TTACTTCAGC AAAAAAAAAT 
TAA 

 

Protein sequence

MKKKIIQLET NYLYYLSGVS RNPRIDITKV KSTLENFTVV ISPWTFVELI TTQDFTNEQK 
KIIVKYIINN QIGVQTFIEN GKYYDFSRLI NDYCYFLFSE PNKLNTFLKR VMKLKKDEEV 
KILNFYIIFI TSFIYYLFYN KLEKLNINKN KKKCFTFCVF YLLEANNSFI NRIIKKIINS 
HYVDFEENKT KKSLTELIGE YGYLISVIYD KVIEGSIHKL YPGFFERIYA FNDLTVNDGA 
SSTSKQFIRL LNKFTSAKKN