Gene TDE1762 details

Gene Information

• Locus tag: TDE1762
• ID: 2740607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1810275
• End bp: 1810994
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637160649
• Product: HAD superfamily hydrolase
• Protein accession: NP_972366
• Protein GI: 42527268
• COG category: [R] General function prediction only
• COG ID: [COG1011] Predicted hydrolase (HAD superfamily)

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0794121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAT ATACATCTTA CCTTTTTGAT ATGGGTTCTA CCTTATTGGA ATTCCATAAT 
TCGAAATGGA ATGAAAGTGA AATACTTAAA AACGGTCATA AACGCATGAC TAGTCATATC 
TCTGGTATCT ATGGACAGTC TATTGCCGAT AAAATAGACA AAGAAGTTAT TTTACCTTGG 
TATGACTATG TTGAAAAAGA GCGTAAAATT AAAAGACTGG AATACCGTAT TTGTGAAGCC 
TTGTTTTTAA AATTTGGAGA GTTGGGTATA CATATTTCTT ATAATGAAAT TATTGAGATA 
TTGAAAAAAG ATTATCTTGA TTTTTATAAT TATGCTCATC CGAATGAAGG AGTGATTGAT 
TGCCTTAAAT TTTTAAAAGA AAAGAAGTGT AAAATCGGTG TTGTTTCAAA CATTATGTAC 
CCCAAAGAAA TATATCTTGA AATTTTTAAG AGAGAGGGGC TTGATTTATT TATTGATAAT 
TATACTTTCA GTTATGAAAA TACCTATATG AAGCCTCATT CTTCTATTTT TTTACGAGCT 
CTTATGTCGC TAAATGCAAA AATTTCAGAA ACGCTTATGG TGGGCGATAA TGAAAAAGTC 
GATGTTATAG GTGCAAAAGC CGTAGGATTA AAAACCTGTT TATACGATAA AGATAAAAAG 
TATAAACAAC ATCAAGCCGA TTTTTATATA AATAATTTTA TGGAACTTAT TGATAATTAA 

 

Protein sequence

MKQYTSYLFD MGSTLLEFHN SKWNESEILK NGHKRMTSHI SGIYGQSIAD KIDKEVILPW 
YDYVEKERKI KRLEYRICEA LFLKFGELGI HISYNEIIEI LKKDYLDFYN YAHPNEGVID 
CLKFLKEKKC KIGVVSNIMY PKEIYLEIFK REGLDLFIDN YTFSYENTYM KPHSSIFLRA 
LMSLNAKISE TLMVGDNEKV DVIGAKAVGL KTCLYDKDKK YKQHQADFYI NNFMELIDN