Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1760 |
Symbol | |
ID | 2740605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1809293 |
End bp | 1809958 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637160647 |
Product | HD domain-containing protein |
Protein accession | NP_972364 |
Protein GI | 42527266 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0857727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGTG AAGAAAAATT TAAAGTAAAA ATCATTCACG ATGCGGAAAA ATATGTAGAA AGTATATTTA GAGAAGATTT TAGCGGTCAT GATTTTTTTC ATACAATGAG AGTGTTTCGT ACGGCAACTT ACATTGCGGA AAAGGAAACT GCCGATATTT TTATTGTTCA ATTGGCGGCC TTATTACATG ATGTAGATGA CCGCAAACTT TCGCCGCACA CAACTGCAAA TAAAGATAGA GCTGTTTCAT TCATGAAATC TAAAAAAATA AGCGATGCTC TATGTAAAAC TATTGTTTCT ATTATTGAAG AAGTTTCGTT TACCGGTAAA GATTCTAATA AGCCGTCTTC AATTGAAGGG ATGTGCGTTC AAGATGCAGA TAGATTAGAT GCTTTAGGTG CGATAGGGAT AGCAAGAGCA TTTGCTTATG GCGGAAGCCA TAATAGACCA ATCTATGATC CGTCTATCCG GCCCCGTATG GGTATGGGAA AAGAGGAATA TCAAAATCAT GTATCGACTA CAATTAACCA TTTTTATGAA AAGCTATTTT ATATTAAAGA TTTGATGAGT ACCGATACGG CAAAAAAAAT TGCAGAAAAA AGAGAATCGT ATATGAAAGA CTTTATTTTG GAATTTTTAA ATGAATGGGA TTTAAAAGAT ATGTAA
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Protein sequence | MTGEEKFKVK IIHDAEKYVE SIFREDFSGH DFFHTMRVFR TATYIAEKET ADIFIVQLAA LLHDVDDRKL SPHTTANKDR AVSFMKSKKI SDALCKTIVS IIEEVSFTGK DSNKPSSIEG MCVQDADRLD ALGAIGIARA FAYGGSHNRP IYDPSIRPRM GMGKEEYQNH VSTTINHFYE KLFYIKDLMS TDTAKKIAEK RESYMKDFIL EFLNEWDLKD M
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