Gene TDE1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1760 
Symbol 
ID2740605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1809293 
End bp1809958 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content34% 
IMG OID637160647 
ProductHD domain-containing protein 
Protein accessionNP_972364 
Protein GI42527266 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0857727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGTG AAGAAAAATT TAAAGTAAAA ATCATTCACG ATGCGGAAAA ATATGTAGAA 
AGTATATTTA GAGAAGATTT TAGCGGTCAT GATTTTTTTC ATACAATGAG AGTGTTTCGT 
ACGGCAACTT ACATTGCGGA AAAGGAAACT GCCGATATTT TTATTGTTCA ATTGGCGGCC 
TTATTACATG ATGTAGATGA CCGCAAACTT TCGCCGCACA CAACTGCAAA TAAAGATAGA 
GCTGTTTCAT TCATGAAATC TAAAAAAATA AGCGATGCTC TATGTAAAAC TATTGTTTCT 
ATTATTGAAG AAGTTTCGTT TACCGGTAAA GATTCTAATA AGCCGTCTTC AATTGAAGGG 
ATGTGCGTTC AAGATGCAGA TAGATTAGAT GCTTTAGGTG CGATAGGGAT AGCAAGAGCA 
TTTGCTTATG GCGGAAGCCA TAATAGACCA ATCTATGATC CGTCTATCCG GCCCCGTATG 
GGTATGGGAA AAGAGGAATA TCAAAATCAT GTATCGACTA CAATTAACCA TTTTTATGAA 
AAGCTATTTT ATATTAAAGA TTTGATGAGT ACCGATACGG CAAAAAAAAT TGCAGAAAAA 
AGAGAATCGT ATATGAAAGA CTTTATTTTG GAATTTTTAA ATGAATGGGA TTTAAAAGAT 
ATGTAA
 
Protein sequence
MTGEEKFKVK IIHDAEKYVE SIFREDFSGH DFFHTMRVFR TATYIAEKET ADIFIVQLAA 
LLHDVDDRKL SPHTTANKDR AVSFMKSKKI SDALCKTIVS IIEEVSFTGK DSNKPSSIEG 
MCVQDADRLD ALGAIGIARA FAYGGSHNRP IYDPSIRPRM GMGKEEYQNH VSTTINHFYE 
KLFYIKDLMS TDTAKKIAEK RESYMKDFIL EFLNEWDLKD M