Gene TDE1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1752 
Symbol 
ID2740597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1804412 
End bp1805488 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content32% 
IMG OID637160638 
ProductISTde2, transposase 
Protein accessionNP_972356 
Protein GI42527258 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000360492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA AGAATGATAC CATAAAAAGT AAAAAATGGA AACACCTTAG CGAAAAAGAA 
AGATATGCGA TAGAAGCATT ATTCAAAAGC GACTATAATG CAAGGCAAAT TGCACAGTCT
TTAAATAGGG ATAGAAGAAC GATACAGAGG GAGATAAAAA GGGGAATGGT AATAAAAGTA
ACAGAAAATC CATATGTAAG CCGTAATCCA AAAGTTCCTG ACTATCTTGA AAAGACAGTT
TACTCGGCAC GAAAAGGACA ACAAAGAGCC GATAAAATGA AATTACTAAA AGGCCGTGGT
TTAAAAATAG GTAAGGATAA AAAACTTTTA CATTATTTGG AAACATGTAT AGCGGATAAT
AAATTTTCTC CTGATGCCGC TATAGGACAA ATAAAAGAAC TAGGCTTACA GTTTCCGGTT
ATGATATGCA CCAAAACTGT ATACAATATG ATAGACAGAG GGGATTTTTC TAGGCTTACA
AACAAAGATT TACCTGTAAA ACGCAATAAA ACTAAACGAA AATATAAAAA AATAAGCAAA
ATTGCTAAAA ACAACATAAA AGGACGCAGT ATTGAACAAA GAAGTGAACA GATAAATAAA
AGACAGGAAA AAGGACATTG GGAAATGGAT TTGGTGATAG GTAAAGGAAG ATGCTGCTTA
CAAGTTATGA CTGAAAGAGT TACTAGAAAA GAATTAATAT TTAAAATCCC CGATAAAAAA
CAGGAAAGTA TTAAAAAAAA TATAGATATG CTTGAGATGA AATATAAAGA TGAGTTTAAA
GAAATATTTA AAAGCATAAC CATGGATAAC GGGACTGAAT TTTTAGACCA AGAAGGCCTT
GAAACCTCTT GTTTAAAAGA AGGAGAAAAA AGGACAACTT GTTATTATGC ACATCCTTAT
AGTTCTTGGG AAAGAGGAAG CAATGAGAAT GCTAATAAAT TAATTAGACG CTTTATACCA
AAAGGAGCAG ATATAAGTAA ATATAGTGAC ATACAAATAA AACAAGTAGA GAATTGGATA
AATAATTATC CTAGACGGAT GTTTGGCTAT AAAACGGCCA ATCAAATGTA TACATGA
 
Protein sequence
MNQKNDTIKS KKWKHLSEKE RYAIEALFKS DYNARQIAQS LNRDRRTIQR EIKRGMVIKV 
TENPYVSRNP KVPDYLEKTV YSARKGQQRA DKMKLLKGRG LKIGKDKKLL HYLETCIADN
KFSPDAAIGQ IKELGLQFPV MICTKTVYNM IDRGDFSRLT NKDLPVKRNK TKRKYKKISK
IAKNNIKGRS IEQRSEQINK RQEKGHWEMD LVIGKGRCCL QVMTERVTRK ELIFKIPDKK
QESIKKNIDM LEMKYKDEFK EIFKSITMDN GTEFLDQEGL ETSCLKEGEK RTTCYYAHPY
SSWERGSNEN ANKLIRRFIP KGADISKYSD IQIKQVENWI NNYPRRMFGY KTANQMYT