| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1751 |
|---|
| Symbol | rplU |
|---|
| ID | 2740596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1803921 |
|---|
| End bp | 1804232 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637160637 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | NP_972355 |
|---|
| Protein GI | 42527257 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000842566 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCAC TTATTGAGTA TAAAGGCAAA CAGTATAAGG CTGAAAAAGG AGCAAAGCTC
GTAGTTGATA AGCTTTCTGC AGAAAGCGGA AGCAAAATCG ACATCGACAC CGTTCTTTTG
ATCAGCGATG GAGATAAGGT TACTGTAGGA ACTCCCTACG TAAGCGGAGC TAAGGTTTCT
GCAACCGTAG GCGATTCTTT CCGAGAAAGA AAGATTATTG TTTACAAGCA TAAGGCTAAA
AAGAACTACC ACAGAACCCA AGGACATAGA CAGGCTCATA CCTGTATTAC TGTTGACAAT
ATTGTCGGAT AA
|
|---|
| Protein sequence | MYALIEYKGK QYKAEKGAKL VVDKLSAESG SKIDIDTVLL ISDGDKVTVG TPYVSGAKVS
ATVGDSFRER KIIVYKHKAK KNYHRTQGHR QAHTCITVDN IVG
|
|---|
| |