| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1739 |
|---|
| Symbol | |
|---|
| ID | 2739197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1791653 |
|---|
| End bp | 1792717 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637160623 |
|---|
| Product | femAB family protein |
|---|
| Protein accession | NP_972343 |
|---|
| Protein GI | 42527245 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00186266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA CTAAGTTCTT AACCGATGAA TACAAAGAAG AATTCGACAA GCTTGTATCT
CATCCCATTC AATCATGGGT TTGGGGCGAC TTTAAAAAAA GTATGGGAGC TGTGCCCGAA
AGGATAGGTT TCTTTGAAGA CGGAAAATTA AAAAACGGAA TTCAGATTAT TTTTTCTAAA
ATACCTAAGA CTAATTATAC GGTTGGTATA GCCTCAAAAA CAATAATGCC GGAACAAGAA
CACATTGAAG CCTTAAAAGA GGCGGCAAAA AAACATAGAG CCGTATTTAT AAAACTAGAA
CCGGATGTAT TTAGTCCTGT ACAAAAAGAT AACTCTTTAG AAGAGACTTC TTCGGATGCA
GGATTTTTAG AAGCTCCTAT TGAAGACAAG AAAAAAATCT TGTTGAAAAA CGGAGCAAAG
AACGGAAAGC CTTTTTTTGA AAAATATAAT TTTCTTTTAA ATATAGAAAA AACCGAAGAA
GATCTTTTAG CCTCTTTTCA TTCCAAAACA AGGTATAATA TCCGCCTTGC CGAAAAAAAA
GGAGTAAGCA TAATAGAGAA GAGCACGGAA GAAGGCATGG AAGATTATAT AAGACTTATG
GAAGAAACTA CGAAAAGACA GGGCTTTTTT AACCATAACG GGGAATACTT TAGACGGATG
TTCAAAATTT TTCCAAAAGA TACCCTTAGA ATATTCGAAG CCGTTTACGG AGATGAAGTT
TTAACTGCAT GGATTCTTTT TAAATTTAAC GGAAAACTTT ATTACCCATA TGGAGCATCA
AGCAATAGTC ATAGGGAATT GATGCCCAAT AACCTCATCA TGTGGAAGGC TATTCAGTAC
GGGAAAAAGT TAAATTGCTC TGTTTTTGAT CTTTGGGGCT GTTTAGGCCC AAACCCTGAT
ACCGAAAATT CATGGTACGG TTTTCATAAA TTTAAGGCAG GATATAATCC TCAGTTGGTA
GAATACATAG GCACATTCGA CTTTGTATAT AAGCCTTTTA TGTACAAACT TTTTAATCTT
GCAGATAAAA TCAGATGGAT TATTTTAAAA AATAAACGCA GATAA
|
|---|
| Protein sequence | MKETKFLTDE YKEEFDKLVS HPIQSWVWGD FKKSMGAVPE RIGFFEDGKL KNGIQIIFSK
IPKTNYTVGI ASKTIMPEQE HIEALKEAAK KHRAVFIKLE PDVFSPVQKD NSLEETSSDA
GFLEAPIEDK KKILLKNGAK NGKPFFEKYN FLLNIEKTEE DLLASFHSKT RYNIRLAEKK
GVSIIEKSTE EGMEDYIRLM EETTKRQGFF NHNGEYFRRM FKIFPKDTLR IFEAVYGDEV
LTAWILFKFN GKLYYPYGAS SNSHRELMPN NLIMWKAIQY GKKLNCSVFD LWGCLGPNPD
TENSWYGFHK FKAGYNPQLV EYIGTFDFVY KPFMYKLFNL ADKIRWIILK NKRR
|
|---|
| |