Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1729 |
Symbol | |
ID | 2739187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1783379 |
End bp | 1783846 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637160612 |
Product | glutathione peroxidase (selenocysteine-containing) |
Protein accession | NP_972333 |
Protein GI | 42527235 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATTT ATAATTACAC AGTTAAGGAC AGCTTAGGAA ATGACTTTTC TTTTAATGAT TACAAAGATT ATGTTATTTT AATCGTGAAC ACGGCTTGTG AGTGAGGACT TACTCCTCAC TTCCAAGGTT TGGAAGCATT ATACAAAGAA TACAGGGATA AAAAATTCCT TGTTGCAGCT TTTCCATGTA ATCAATTCGG CGGTCAAGAT CCGGGCACAA ACGAGGAAAT CAGAAATTTT GCTCAAAGTA AGTATGGGGT TTCTTTCCCC ATAATGGCAA AAATTGAAGT CAACGGTGAA AATACCGAAC CTATTTTTTC TTTTTTAAAA AAAGCTTCAA ACGGTGAAGA CATAAAATGG AATTTTGCCA AATTCTTAGT CGATAAAACG GGAGAAAGAG TTACCGCCTA TGCTCCGACT GTTGCACCTG AAGACTTAAA AAAAGATATT GAAAAACTAT TGAATTAG
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Protein sequence | MGIYNYTVKD SLGNDFSFND YKDYVILIVN TACEUGLTPH FQGLEALYKE YRDKKFLVAA FPCNQFGGQD PGTNEEIRNF AQSKYGVSFP IMAKIEVNGE NTEPIFSFLK KASNGEDIKW NFAKFLVDKT GERVTAYAPT VAPEDLKKDI EKLLN
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