Gene TDE1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1720 
Symbol 
ID2739178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1774603 
End bp1775292 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID637160603 
Productradical SAM domain-containing protein 
Protein accessionNP_972324 
Protein GI42527226 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT GTATCAAAGA TCAGATTCAA AACATGAATA TTGTCATCGG CTGTACAGTG 
GGGTGTGCAT ATTGCTATGC CCGCAACAAT GTGAAACGCT GGCATATGAT TGATGACTTC 
GCTGACCCTG AATTCTTTCC GGGAAAGCTC AAGATGATGG AAAAGAAACG TCCGCAGAAC 
TTTCTTCTTA CCGGCATGAG CGATCTCTCC GGATGGAAGC TGAAATGGAG AGACGAGGTA 
TTTGCAAAGA TCCGTGAAAA TCCACAGCAT CAGTTCCTGT TTCTTACCAA GCGCCCCGAT 
CTGCTGGAGT TTGATACCGA TCTGGAAAAC GCATGGTTTG GCGTTACAGT AACGAGGAAA 
GCAGAACTGT GGCGTATTGA CGCGCTTCGG AGAAACGTCA GAGCAAAACA CTACCATGTT 
ACCTTTGAGC CGTTATTCGA CGATCCCGGT ACAGTTGGAC TTTCCGGAAT CAACTGGATC 
GTTGTCGGCA CCATGACCGG AGCTCAGAGC AGGAAGGTTC ATACGGAGCC GGAGTGGGCA 
TGGTCTCTGA CGGACCAGGC ACACGCGCTC GGCATTCCGG TGTTTATGAA GGAAGACCTT 
GTCTCTATCA TAGGGGATGA AAATATGATT CAGGAAATGC CGGAAGAATT CAATAAAGTG 
TTGGAGGTAC AGAGATCATG GCAGAAGTAA
 
Protein sequence
MSICIKDQIQ NMNIVIGCTV GCAYCYARNN VKRWHMIDDF ADPEFFPGKL KMMEKKRPQN 
FLLTGMSDLS GWKLKWRDEV FAKIRENPQH QFLFLTKRPD LLEFDTDLEN AWFGVTVTRK 
AELWRIDALR RNVRAKHYHV TFEPLFDDPG TVGLSGINWI VVGTMTGAQS RKVHTEPEWA 
WSLTDQAHAL GIPVFMKEDL VSIIGDENMI QEMPEEFNKV LEVQRSWQK