Gene TDE1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1715 
Symbolpgk 
ID2740887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1769593 
End bp1770852 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content41% 
IMG OID637160598 
Productphosphoglycerate kinase 
Protein accessionNP_972319 
Protein GI42527221 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000533378 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGA CTGTAAAAGA TGTAAATTTA AAGGATAAAC GCATAATAAT GCGTGTAGAT 
TTTAACGTTC CTATGAAGGA CGGAGTAGTG CAGGATGATA CGCGGATTAG GGCGGCTCTT
CCTACAATAA AATATATATT GGAACAAGGA GCAAGAAGCC TTGTTTTGAT GAGCCATTTG
GGTGATCCTT CAAAAGATGC AAAAAAAGCC AAGGAAAAGG CCGAAAAAGA CGGAAAACCC
TTTGATGAGG AAGCTTATAT TAACGGAAAG CATAGGATGA AACCTGTTGC AGAATACTTA
TCCGGCCTTC TTAAACTTCC TGTTGATTTT GCTCCCTCCT GCATGGGACA GCTTGAAAGG
GTAAAAGCTC TTCCACAGGG CGGAATTCTA ATGCTTGAAA ACACCCGCTT CCACAAAGAA
GAAACTTCAA AGGAAAAGGC CGAGCAGCAA ATCTTGGCAA AAGAACTCAG CTTGTACGGT
GATATCTATG TAAATGATGC TTTTGGAACG GCTCACCGCT CTCATGCTTC TACAGCCGAA
ATTGCCAACT TTGTCAATAC AAGGGTAGCC GGCTTTCTTA TGGAAAAGGA AATTAAATAC
CTTGAGCCAA TGTTAAATAA TCCTGCAAAG CCAATGACGG CAATTATAGG AGGAGCAAAG
GTTTCTTCCA AAATTGCAGT TTTGGAAAGT CTTTTAAAAA ATGCATCTTC TTTAATTATA
GGAGGAGGAA TGGCCTACAC CTTCTTAAAG GTTCAAGGAA AAAAGATCGG TAAATCCTTA
TTTGAAGAAG ATTTTATGGA TACTGCTAAA AATCTTTTGG ATAAGGCTGA AAAACAGGGT
GTAAAGATAA TCCTTCCTGT TGATCATATC TGTTCCGAAA CCTTTTCTCC CAATGCCGAA
GCCGTTTTAG TTGAAAGCAC AGATATTCCC GATAATCTTA TGGGAATGGA TGTAGGCCCT
AAGACCTTGG CTCTTTATAA AGAGATTATT TTGTCGTCAA AGTCCATTGT CTGGAACGGC
CCCGTAGGCG TTTTTGAGTT TGAGGCTTTT TCAAAGGGAA CGGAAGAAAC TGCCCGCCTT
GTAGCAGCTG CAACGGAAAA AGGTGCACTT ACAATCGTAG GCGGAGGTGA TTCGGTTGCT
GCCGTAAATA AGTTCAATCT TGCCGATAAG ATGAGTCATG TTTCTACCGG CGGCGGAGCT
TCCCTCGAAT TCCTTGAAGG AAAAGTTCTC CCCGGCATTG CCTGTCTTGA TACTATTTAA
 
Protein sequence
MIKTVKDVNL KDKRIIMRVD FNVPMKDGVV QDDTRIRAAL PTIKYILEQG ARSLVLMSHL 
GDPSKDAKKA KEKAEKDGKP FDEEAYINGK HRMKPVAEYL SGLLKLPVDF APSCMGQLER
VKALPQGGIL MLENTRFHKE ETSKEKAEQQ ILAKELSLYG DIYVNDAFGT AHRSHASTAE
IANFVNTRVA GFLMEKEIKY LEPMLNNPAK PMTAIIGGAK VSSKIAVLES LLKNASSLII
GGGMAYTFLK VQGKKIGKSL FEEDFMDTAK NLLDKAEKQG VKIILPVDHI CSETFSPNAE
AVLVESTDIP DNLMGMDVGP KTLALYKEII LSSKSIVWNG PVGVFEFEAF SKGTEETARL
VAAATEKGAL TIVGGGDSVA AVNKFNLADK MSHVSTGGGA SLEFLEGKVL PGIACLDTI