Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1711 |
Symbol | |
ID | 2740883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1765642 |
End bp | 1766808 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637160594 |
Product | RelA/SpoT domain-containing protein |
Protein accession | NP_972315 |
Protein GI | 42527217 |
COG category | [S] Function unknown |
COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000626045 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTCACT TAAATATCTT GATAGTGCGC ATAGAGGAGT TTCTACGTTC TATAGTAAAA ATAACTTCTG CTCCTACATA TAAAACAAGG GTAAAAAGTT TTAATAGTTA TTATTTGAAA CTTTTAAAAT TTCCTCCCAA AAAAGATACA TCAGATCTTC CTGTTCTTAC CGACATTCTG GGAGTAAGAA TAATATGTCC ATTTTTACAG GACATAAATG AAGTTGAAAG AATTCTGCTA AAAAATTTTA AGATAATAGA AGTGGAACGT AAGGGGTCTG AAAGAACTTT TAGAGAATTC GGGTATGAAT CGGTTCATTT TTTGCTTGAC ATACCTGAAG AATTTAAGGT AGGTCTTGTC TTACCTAAAA ATTTAATTTT TGAGATACAG CTTAGGACTA TTCTTCAAGA TGCCTGGGCT GAGGTTGAGC ACGAGTTGGT ATATAAATCG GAGTTTTCTC CCTTTGATCA ACCCCTAAAA AGAAAGCTTG CTTCGATAAA CGCAAGTTTG AGTTTGGCTG ATATTATTTT TCAGGAAATT CGCGATTATC AAAACAAGCT TAATGCCGAG CTTGAAAAAA GGCGCTTTGA ATTTTATTCG ATGGCTGATG AATATACGGC TCAAGTTTTA CCTGAAACCA ATATTGTTCA ACATGATAAT GTTGAGCATG GAGAGGAGTT GAAGCTTGCC GAAACTATAG ATGATTTGAT ATTATCTGCA ATTGAAGCTC ATAATCAAAA CCTTTTCGAT AAGGCCGAAA AGATTTATAC AAAAATAATT GAGCAAAATC CTAACGATAT AGTTTTGTCG GTTGTATATA AACACAGAGG TATGGCCTAT TTTGCCCAAG CTAATTATGA AGGCGCCTAT GCCGATTTTT TGCAGAGCTG TAAATATAAT TCTGCAAATT TTCGTTCGTT TTATTATGTG GGAATAGCTT TAACTCTCTT AAACAGAGAT GATGAAGCCA TTGAATATTT TACAAAATCG CTTGAAATAA ATAAGTTTCA AGCCCATGTT TATTTTAGGC GTGCCTTGTC CTATTTTAAA CTGGCCTTAT ATCCTGAAGC TGCCAGGGAC TTGGATTCTG CCTCGGACCT TGGTTTAGCC GAAGAAGATG CAAAAAAATT GCGTATAGCT ATTGCAAAAA AAATTGATAT GGTGTAA
|
Protein sequence | MPHLNILIVR IEEFLRSIVK ITSAPTYKTR VKSFNSYYLK LLKFPPKKDT SDLPVLTDIL GVRIICPFLQ DINEVERILL KNFKIIEVER KGSERTFREF GYESVHFLLD IPEEFKVGLV LPKNLIFEIQ LRTILQDAWA EVEHELVYKS EFSPFDQPLK RKLASINASL SLADIIFQEI RDYQNKLNAE LEKRRFEFYS MADEYTAQVL PETNIVQHDN VEHGEELKLA ETIDDLILSA IEAHNQNLFD KAEKIYTKII EQNPNDIVLS VVYKHRGMAY FAQANYEGAY ADFLQSCKYN SANFRSFYYV GIALTLLNRD DEAIEYFTKS LEINKFQAHV YFRRALSYFK LALYPEAARD LDSASDLGLA EEDAKKLRIA IAKKIDMV
|
| |