| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1695 |
|---|
| Symbol | |
|---|
| ID | 2740867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1749588 |
|---|
| End bp | 1754090 |
|---|
| Gene Length | 4503 bp |
|---|
| Protein Length | 1500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637160578 |
|---|
| Product | CoA-substrate-specific enzyme activase domain-containing protein |
|---|
| Protein accession | NP_972299 |
|---|
| Protein GI | 42527201 |
|---|
| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
[COG3580] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.990172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAG AGAGTGTGCT GCGATTCGGA ATAGATGTCG GCTCGACTAC AGTAAAGGTA
GTTGTTTTGG AAACTGACGG GACGGTTTTG TTCAGTAAAT ATCAAAGACA CAGAGCCGAT
ATAAGAACGA CTATTATATC CGTGTGCGAG CTTGCCGTTG AAGCCGTCGA AAAAAAATAC
GGCGAAGATG TGGAGCTATC CCTCATCGTA ACCGGATCCG GAGGCCTTGC CGTATCGCAC
TGGCTTAAAA TTCCCTTTAT TCAAGAAGTC GTAGCATCTA CTGCGGCTGT TCGTAAGATA
ATTCCTCAAA CCGATGTTAT TATAGAACTC GGCGGCGAAG ATGCAAAGAT TACCTATTTT
GAGCACGCCA ATATCGAACA AAGAATGAAC GGTACCTGTG CAGGCGGTAC GGGTTCCTTT
ATAGACCAGA TGGCTGCCCT CTTGGAAACC GATGCTCTTG GTTTAAACGA GCTTGCAAAA
AAAGCTCAGA CCATCTATCC GATAGCCGCC CGCTGCGGGG TCTTTGCCAA AACCGATGTT
CAGCCCCTTA TAAACGAGGG TGCAAAAAGA GAGGACATAG CAGCAAGTAT CTTTCAAGCT
GTTGTAAGCC AGACTATTTC GGGTCTTGCC TGCGGTAAAC CTATCCGCGG AAAGGTCGCT
TTTTTAGGAG GCCCCTTACA CTTTTTAGAT CAGCTAAGGC ACAGGTTTAT CGAAACCTTA
AAACTTAAAG ATGACGAAAT TATTACGCCT GAAAATTCCG AGCTCTTTGT AGCCATGGGA
GCTGCCTTAA GTGCTGCAGG AAGCTCTAAT ATACCTAAGG CTTCAAGCTC TCCCTTTCAG
CCGCAGGTTC CATTGGATCT AAAAAAAGCT CAATTTAAAA CCTCCTTAAA AAAAGAAGAA
AACAAAGCGC CTCTTATTTT TGAAGAAGAG CCTACAGCTA AACCTCATTT TATAAAACTT
TCTCAATTTA AAAAAGATAT TTATAAGATA GCTTCTTCAG AGATGACTGA GGTTCAGCGC
CTGCCTCCTC TTTTTAAAAA TGAAGAAGAA CTTGAAAGTT TTAGAATAAG ACACGCAAAG
GAAATGGCTC CCTCAGCCGA TATTTCCGGT GCTTCGGGAC CTGTATTTTT AGGGCTTGAT
GCAGGCTCAA CTACAACCAA GGCCGTTTTA ATCGATGGGG ACGGAAAAAT CCTATGGCGT
TTTTATGATG TAAATGCGGG AAACCCCGTC GAACTTGCTG TAAGGGTTTT AAAAGACCTC
TATAAGATAC TTCCTCCAAA GGCCTTTATA GCCCGATCTG TTTCTACAGG ATATGGAGAA
AGCCTTTTTC AGGCAGCTTT AGGTGTGGAT GCCGGAGAAG TTGAAACAAT CGCACACTAC
CGTGCCGCAG AATTCTTTTT GCCCGGAGTG GATTTCCTTT TGGATATAGG CGGACAGGAT
ATGAAATGCC TCCGCATGAA AAACGGAGCG ATAAGTTCTA TTCAGCTAAA TGAGGCCTGT
TCCTCTGGCT GCGGAAGCTT TTTAGATAAT TTTGCCCGCT CCCTCGGAAT GAACATAAGC
GAGTTTGCAA CCAAAGCCCT TCTTGCAGAA AAACCGGTAG ACCTAGGTAC AAGGTGTACT
GTCTTTATGA ACAGCCGTGT TAAGCAGGCT CAAAAAGAAG GAGCTTCCGT AGGAGATATT
TCTTCGGGTC TTTCTTATTC CGTTATAAAA AATGCCCTCT TTAAGGTTAT TAAATTGCGC
GATGCATCCG AGGTAGGAAG TAAGGTAATA GTGCAGGGCG GAACATTTAA TAATGATGCG
GTTTTGCGTG CCTTTGAGCT TGTTTCGGGA AGGCAGGCTG TCCGCCCCGA TGTTGCAGGG
CTTATGGGGG CTTATGGAGC CGCCTTAATT GCAAAAGACC AATGGCATGA CCTTCAAGAA
GAAAATCTTT CCGAAGGAAA AATAAGATCA AATATTGCCG ATATGGAAGG CTTGGAAAAT
TTTAAGGTAA AGCTTGACTT ATTACGCTGT CCCAAATGCC CCAACAACTG TCTTTTGACT
GTAAATACCT TCGACATATC CGGAGTAAAA CGCCGTTTTA TCACGGGAAA CAGGTGTGAA
AGGGGTGCCG AGCTTGATAA GAACAGTGGC CTTGAAGAAT GTTCATCTCA AGTTTCCGCT
AAGGATCACG AAACAGTAAA CAAAAAAGAT ATACCCAACC TCTTTGACTG GAAGTATAAG
AGGCTTTTTA AATATAAGCC CATTCCTAAA AATGATGCAC CCAGAGGCGA GATTGGAATT
CCAAGGGTTT TAAACATGTA CGAAAACTAT CCGTTCTGGT TTACCTTTTT TACGGAACTT
GGTTTTTCGG TTAGAATTTC TCCTCGCTCT ACACGGGGAA CTTATGAGAT GGGGCTCGAA
TCTATTCCTT CCGAATCGGT TTGTTATCCT GCGAAGATTG CCCACGGGCA TATCGAAGCT
CTCTTAAAAT TAGGAGTAAA AAATATCTTC TACCCCTGTA TTCCATACGA AAAAAAAGAA
GATGAGGGGG CCGGAAATCA TTATAACTGT CCCATTGTTA CAAGTTATCC TGAAGTCTTA
AAAAACAATA TTGATGTTCT CAGGCAGGAC GCGAATATAA TTTATCTAAA TCCATTTTTA
CCATATTACG ATAAACACCG TTTAATTGAC CGTCTTTATG AAGAATTGGG TACAAAGTTT
TCGATAAGTT TTGAAGAGAT AAGGGATGCC GTCAATTCCG CTTGGGAAGA GGAAAATAAT
TTTAAAAAAG AAACGGAAGA AAAAGGCGAA GAAGTATTGC GTTTAATGAA GGAAAAAAAT
CTAAAAGGTA TTGTGCTTGC AGGACGCCCC TATCATCTTG ACCCTGAAAT AAACCACGGC
ATCCCTGAGA TGCTCAACGG TTTAGGTCTT GCAGTTTTGA CGGAAGATTC CGTAGCTCAC
TTGGGAAAAA TAGAACGACC CTTACGTGTT GTGGATCAAT GGAGCTATCA CAACCGCTTA
TACAGGGCGG GGAATTTTGC CTCAACTCAA GATGATTTGG AATTTATACA GCTTACCAGT
TTCGGCTGCG GCTTGGATGC GGTAACAGCC GATCAAGTGC AGGAAATAAT AGAATCCAAG
GGAAAAATGT ACACCCTTAT AAAAATAGAT GAGGGCTCTA ATCTGGGTGC TGTAAGGATA
AGGGTAAGAA GCCTATTGGC TGCCGTAAAG GAAAGGAAAA GAAGCAGGCT TATTTTAAGC
AAAAAATCGG CAGCCTATGA GCGCATAGTT TTTTCAAAAG AGATGGAAAA ACGGTACACC
ATTCTGGCAC CTCAAATGTC TCCCATTCAT TTTGACCTTA TAGGGGCAGC TATTTCTCAT
TCCGGTTATA ACCTTGAGAT CCTTACCGAT ATAGATCAAA CTGCCGTTGA ATACGGCTTA
AAGTATATAA ACAATGATGC TTGCTATCCT GCAATCATAG TTGCAGGTCA GATGATAGCT
GCTTTAAAAT CGGGCCGTTA TGATTTACGC ACCACAGCTC TGGCTATTAC CCAAACAGGG
GGAGGCTGCC GAGCCACAAA CTACATAGGC TTTATAAGGC GTGCCCTCAT AGATGCAGGC
TTGGGCTTTG TTCCGGTAAT AGGTATAAGT GCCCAGTCCA TCGAAAAAAA TCCCGGCTTT
AAATTAAAGC TCCCTGTTTT ACACAGGGTC GCTCAAGCTA TGTGTCTCGG CGACCTTTTA
ATGAGGGTGC TTTATCGTAC ACGTCCCTAC GAAAAAGTTC CCGGTTCTGC AAACGAAATA
TATAAAAAAT ATGCCGTCCT TATCAAGGAT GCTATAAAAA AAATGTCTCC AAAAAAATAT
AAGGAGATTA TAAACGGCAT TGTACGCGAG TTCGATAATC TACCCTTAAA AAATATTAGA
AAACCGCGTG TAGGTGTAGT AGGAGAAATA TTGGTTAAAT TCCATCCTGC CGCAAATAAC
GATATTTTCA GTACCATTGA AAGGGAAGGG GCGGAATGCG TTGTTCCCGA TCTTTTAGAT
TTTTTCCTTT ATTCTTCTAT TTCGGGTATC TATCAAAATA CCTATCTCGA TTACTCGTTT
AAAAAACGCC TCTTTGCAAA GCTTGGTATC TGGGTAATGG AAAGATACAG AAGGCCCATA
AAAAAAGCTT TAAATAAGAG TAAGCGTTTT ACTTCTCCTG AGAGTATATA CAGATTGGCC
GATTCGGTTG ACGGAATTTT ACAGCTTGGA AATGTTACCG GGGAGGGCTG GTTTTTAACT
GCCGAAATGA TAGAGCTCAT TCATTCGGGC GTTTCAAATA TTGCCTGTGT TCAGCCCTTT
GCCTGCCTTC CAAATCACGT AACCGGAAAA GGTATGATAA AGGAATTGCG CCGCCGTTAC
CCCGAGGCAA ATATTTCGGC TATCGACTTT GACCCCGGCG CCAGCGAAGT AAACCAGCTC
AACCGTTTAA AACTCCTTCT CGCCAACGCA AAACCCGGCC TTCACCCGGA TGAAACGAAG
TGA
|
|---|
| Protein sequence | MNRESVLRFG IDVGSTTVKV VVLETDGTVL FSKYQRHRAD IRTTIISVCE LAVEAVEKKY
GEDVELSLIV TGSGGLAVSH WLKIPFIQEV VASTAAVRKI IPQTDVIIEL GGEDAKITYF
EHANIEQRMN GTCAGGTGSF IDQMAALLET DALGLNELAK KAQTIYPIAA RCGVFAKTDV
QPLINEGAKR EDIAASIFQA VVSQTISGLA CGKPIRGKVA FLGGPLHFLD QLRHRFIETL
KLKDDEIITP ENSELFVAMG AALSAAGSSN IPKASSSPFQ PQVPLDLKKA QFKTSLKKEE
NKAPLIFEEE PTAKPHFIKL SQFKKDIYKI ASSEMTEVQR LPPLFKNEEE LESFRIRHAK
EMAPSADISG ASGPVFLGLD AGSTTTKAVL IDGDGKILWR FYDVNAGNPV ELAVRVLKDL
YKILPPKAFI ARSVSTGYGE SLFQAALGVD AGEVETIAHY RAAEFFLPGV DFLLDIGGQD
MKCLRMKNGA ISSIQLNEAC SSGCGSFLDN FARSLGMNIS EFATKALLAE KPVDLGTRCT
VFMNSRVKQA QKEGASVGDI SSGLSYSVIK NALFKVIKLR DASEVGSKVI VQGGTFNNDA
VLRAFELVSG RQAVRPDVAG LMGAYGAALI AKDQWHDLQE ENLSEGKIRS NIADMEGLEN
FKVKLDLLRC PKCPNNCLLT VNTFDISGVK RRFITGNRCE RGAELDKNSG LEECSSQVSA
KDHETVNKKD IPNLFDWKYK RLFKYKPIPK NDAPRGEIGI PRVLNMYENY PFWFTFFTEL
GFSVRISPRS TRGTYEMGLE SIPSESVCYP AKIAHGHIEA LLKLGVKNIF YPCIPYEKKE
DEGAGNHYNC PIVTSYPEVL KNNIDVLRQD ANIIYLNPFL PYYDKHRLID RLYEELGTKF
SISFEEIRDA VNSAWEEENN FKKETEEKGE EVLRLMKEKN LKGIVLAGRP YHLDPEINHG
IPEMLNGLGL AVLTEDSVAH LGKIERPLRV VDQWSYHNRL YRAGNFASTQ DDLEFIQLTS
FGCGLDAVTA DQVQEIIESK GKMYTLIKID EGSNLGAVRI RVRSLLAAVK ERKRSRLILS
KKSAAYERIV FSKEMEKRYT ILAPQMSPIH FDLIGAAISH SGYNLEILTD IDQTAVEYGL
KYINNDACYP AIIVAGQMIA ALKSGRYDLR TTALAITQTG GGCRATNYIG FIRRALIDAG
LGFVPVIGIS AQSIEKNPGF KLKLPVLHRV AQAMCLGDLL MRVLYRTRPY EKVPGSANEI
YKKYAVLIKD AIKKMSPKKY KEIINGIVRE FDNLPLKNIR KPRVGVVGEI LVKFHPAANN
DIFSTIEREG AECVVPDLLD FFLYSSISGI YQNTYLDYSF KKRLFAKLGI WVMERYRRPI
KKALNKSKRF TSPESIYRLA DSVDGILQLG NVTGEGWFLT AEMIELIHSG VSNIACVQPF
ACLPNHVTGK GMIKELRRRY PEANISAIDF DPGASEVNQL NRLKLLLANA KPGLHPDETK
|
|---|
| |