| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1683 |
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| Symbol | atpA |
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| ID | 2740138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1734935 |
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| End bp | 1736704 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637160566 |
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| Product | V-type ATP synthase subunit A |
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| Protein accession | NP_972287 |
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| Protein GI | 42527189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1155] Archaeal/vacuolar-type H+-ATPase subunit A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00187142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA CAAAAGGAAA AGTAGTCGGT ATTAACGGTA ACATGATAAG CGTTTCTTTT
GAAGGCTTGG TTACCCTTAA CGAGGTAGGC TATGTTGAGG TTGGTTCAAA AAAACTAAAA
AGCGAGGTAA TCCGTATCAG GGGGGAAGTA GCTCAGCTTC AAGTATTTGA AATTACAAAG
GGAATAAAGG TCGGTGATAT CGTAGAGTTT ACCGGAGATC TTCTTTCGGT AGAGTTGGGC
CCCGGTCTTT TAGGCCAAGT TTATGACGGG CTGCAAAATC CCTTACCTGA GCTCGCTGAA
CAAGCCGGTT ATTTTTTGGA AAGAGGTATC TATTTAAATG CCCTTTCCCG CACGGCAAAA
TGGCACTTTA CTCCCTCTGC TAAAGAAGGA GACACATTAA AGCGAGCAGA CTTGCTGGGA
ACCGTACCTG AAGGCAGTTT TACCCATCGT ATCATGATTC CTTTTAACAT GTATGGAACT
TATAAATTAA AATCTATAAA ACCTGAAGGC GATTATACAG TAGACGATAC AATAGCCGAG
GTTACGGACG AAAGAGGAAA CGTAATACCT CTTACCATGA GTTTTAAGTG GCCTGTAAAA
CGTGCAATCG ACTGTTATGC AGAACGCTTA AAGCCGACGG AAACCTTGGT TACAAAGATG
AGAACAATGG ATACATTTTT CCCCGTTGCT AAGGGCGGAA CCTATTGTAT TCCCGGTCCA
TTCGGTGCAG GAAAAACCGT TTTGCAGCAT GCTACCAGCC GAAATGCCGA TGTCGACATC
GTTATTATTG CAGCCTGCGG TGAGCGAGCC GGTGAAGTTG TAGAAACTCT TACAGAATTC
CCCGAGCTTA AAGACCCCAA AACGGGCCGA ACCCTCATGG AGAGAACCAT AATTATCTGT
AATACGTCTT CAATGCCGGT TGCTGCCCGA GAGGCCTCGG TTTATACAGG CGTAACCCTC
GCGGAATACT ATCGCCAAAT GGGCTTGGAT GTTCTTCTTC TTGCAGACTC TACCAGCCGA
TGGGCTCAGG CTCTTCGAGA AATGTCGGGC CGCTTGGAAG AAATCCCCGG TGAAGAAGCC
TTCCCTGCCT ATCTTGAATC CTACATCGCC GCCTTCTACG AAAGGGCAGG TATTGTCCGA
TTAAGCGACG GTTCAAAGGG CTCCGTTACA ATCGGAGGAA CCGTATCTCC TGCTGGCGGT
AACTTTGAAG AGCCCGTAAC TCAAGCCACG CTAAAGGTAG TAGGAGCCTT CCATGGTCTT
TCACGAGAAA GATCCGATGC CCGAAAGTAT CCGGCAATTC ACCCCCTCGA TTCTTGGTCA
AAATATCCCA GCGTTCTTCC TTTAGAACAA GTCAAATACG GAAGAAGCTT TTTACGCCGA
GGAACCGAGG TTGAACAGAT GATGAAGGTT GTAGGTGAAG AAGGAACAAG TATAGAAGAC
TTTATCATTT ACTTAAAAGG CGACTTACTC GATGCCGTTT ACTTACAGCA AAACTCCTTT
GATAAGGTAG ACGATGCAGT TTCGGTTGAG CGCCAACAGC ACATATACAA TATTTTGATT
GAAATTTTAG GTACTTCATT TAAATTTGTT TCAAAAGATG AAGCCCGCTC TTATTTCAGC
AAACTTAAAC TTATGTTCAT CGACTATAAC TACTCGCCTT GGGGCTCGGA TGCATTTAAA
TCCCATGAAG ACGGAATTAA AAAGCACATC GCCGAAAAAG CGGATAGCTT AGACGAAAGA
GCTAAAAAAT TATTGAAGCA GGCGGTGTAA
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| Protein sequence | MTKTKGKVVG INGNMISVSF EGLVTLNEVG YVEVGSKKLK SEVIRIRGEV AQLQVFEITK
GIKVGDIVEF TGDLLSVELG PGLLGQVYDG LQNPLPELAE QAGYFLERGI YLNALSRTAK
WHFTPSAKEG DTLKRADLLG TVPEGSFTHR IMIPFNMYGT YKLKSIKPEG DYTVDDTIAE
VTDERGNVIP LTMSFKWPVK RAIDCYAERL KPTETLVTKM RTMDTFFPVA KGGTYCIPGP
FGAGKTVLQH ATSRNADVDI VIIAACGERA GEVVETLTEF PELKDPKTGR TLMERTIIIC
NTSSMPVAAR EASVYTGVTL AEYYRQMGLD VLLLADSTSR WAQALREMSG RLEEIPGEEA
FPAYLESYIA AFYERAGIVR LSDGSKGSVT IGGTVSPAGG NFEEPVTQAT LKVVGAFHGL
SRERSDARKY PAIHPLDSWS KYPSVLPLEQ VKYGRSFLRR GTEVEQMMKV VGEEGTSIED
FIIYLKGDLL DAVYLQQNSF DKVDDAVSVE RQQHIYNILI EILGTSFKFV SKDEARSYFS
KLKLMFIDYN YSPWGSDAFK SHEDGIKKHI AEKADSLDER AKKLLKQAV
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