| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1676 |
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| Symbol | rpsR |
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| ID | 2740131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1729463 |
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| End bp | 1729732 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637160560 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | NP_972281 |
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| Protein GI | 42527183 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000141185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCTA ACATGCAGGA AAATATTCGC GAAGGCGAAG ACAAAAGAAA GGGTAGATCT
TTTTACCGCA AAAAGGTTTG CCGCTTTTGT GCACAAAAGG TAAAGATCGA TTATAAAGAA
CCGGATGCCT TACGCCGTTT TATAACCGAG AGAGGTAAGA TTCTTCCCAG AAGAATTACC
GGAACTTGTG CAAAACACCA GCGAAAACTT GCCGTTGAAA TTAAGCGTGC AAGAGCTGTT
GCATTGCTTC CTTTCGTTAT GAACGAATAG
|
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| Protein sequence | MEANMQENIR EGEDKRKGRS FYRKKVCRFC AQKVKIDYKE PDALRRFITE RGKILPRRIT
GTCAKHQRKL AVEIKRARAV ALLPFVMNE
|
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