Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1675 |
Symbol | rplI |
ID | 2740130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1728733 |
End bp | 1729332 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160559 |
Product | 50S ribosomal protein L9 |
Protein accession | NP_972280 |
Protein GI | 42527182 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0359] Ribosomal protein L9 |
TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000107335 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA TTTTAAATGA AGATGTTAAG TATCTCGGAG AAGAAGGCGA TATTAAGAAC GTAGCTAAGG GATATGCCCG AAACTACCTT TTCCCCAGAA ACTTAGCTGT TCCTTGTAAT GAGTTTACTC TGGCTCATTT TGAATCACGT AAAGAAGAAA TTGAAGCTAA AAAGGCTGCA AAACGCCAAG ATGCTGCAGG GCTTAAAGAA AAACTTGAGG CTCTTTCAAT TAAGATTCTT ATGCCTGCAG GACCTAACGG AAAACTCTAT GGTGCCGTTA CAACTCAAAC TCTTTTTGAT GAACTGCAAA AACTTAATTT CGATATTGAA AGAAAACGTA TCGAAATCCT CGGTCAGACA GTTAAGAGCA CAGGTGTACA TAAGGCCATT GTAAAGCTTT ATGAAAATAC CTCTGCAGAG ATTTCTTTTA CCGTTGAGGC TCAGATTGCT GAAGAAAAGC CCGTTAAGGC TTCCGAGAAA AAAGGACGAA GACCTCGCAG GGATGAAGAA GCTTCTGATG AACAAATTTT AGCAGAAGAA AATTCCGTTA CTGAAGAAGC CGTTTCTGAA GAAATTCAAA ATTCGGAATC GGAAAACTAA
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Protein sequence | MKVILNEDVK YLGEEGDIKN VAKGYARNYL FPRNLAVPCN EFTLAHFESR KEEIEAKKAA KRQDAAGLKE KLEALSIKIL MPAGPNGKLY GAVTTQTLFD ELQKLNFDIE RKRIEILGQT VKSTGVHKAI VKLYENTSAE ISFTVEAQIA EEKPVKASEK KGRRPRRDEE ASDEQILAEE NSVTEEAVSE EIQNSESEN
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