Gene TDE1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1670 
Symbol 
ID2739011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1724003 
End bp1724551 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content29% 
IMG OID637160552 
ProductMarR family transcriptional regulator 
Protein accessionNP_972275 
Protein GI42527177 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000203174 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAATG ATATTTATAA AAATGAAATA ATTAATGCAT GGGTAGAAGA CAATGAGCCT 
GTAGATTTGA TTGAAAAAAG GTATAAAAAT ATAAGCAATA TTGTTGATGG CATGTACGAT
TTTGTATTAT CATTTTCTTA TTATTATACT ATAAGGAGAG ATTATGGTAC GGGTAAGAAA
TATACGATGA TTGAAATGCA TATTTTGACC GATATTTATG ATAATGAAAA TATAACGGTT
TCAGCTTTGG CAAAAAAATG GAATAGAACA TCAAGCGCAA TTTCTCAAAT TGTGCATAGG
CTTATAAAAT GGGGCTTGGT TTATAAGGAG GTAAACCAAG CTGACGGTAA AGTCTTTTTT
TTGCACACTA CAGAAAAAGC AAAAAAAACG GTTTTAACTC ATAAAGCTTA TGACAATAAA
GACAATGTCA AGACAAGAAA AAAACTTCTT GAAACTTTTA CCGTTGATGA AATGGTAGCT
TTTGATAAAA TTTTGAAAGC TTACACCGAT ATTCTCGAAA AAAATAACAG CAAAAATAAG
CCTTTATAA
 
Protein sequence
MLNDIYKNEI INAWVEDNEP VDLIEKRYKN ISNIVDGMYD FVLSFSYYYT IRRDYGTGKK 
YTMIEMHILT DIYDNENITV SALAKKWNRT SSAISQIVHR LIKWGLVYKE VNQADGKVFF
LHTTEKAKKT VLTHKAYDNK DNVKTRKKLL ETFTVDEMVA FDKILKAYTD ILEKNNSKNK
PL