Gene TDE1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1644 
Symbolfmt 
ID2739753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1694668 
End bp1695636 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content41% 
IMG OID637160527 
Productmethionyl-tRNA formyltransferase 
Protein accessionNP_972250 
Protein GI42527152 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCC TTTTTGCGGG AACTCCTTCC TGTGCCGTAC CTGCCTTAAA CCTGATAGCT 
CGCGAATTTG ACCTTTGCGG AGTATTGACA AATCCTCCGG CTCCGGCAGG ACGGAATAAA 
AAGATGCAGG ATTCCGATAC GGCTCTTGCA GTAAAGGAGC TTATAAAAGA AGGTGTTTTA 
CCGGAAAACT TTCCTATTTT GACACCTCAA AAACTTGATG ATAATTATAG AAAAGAACTT 
GAGGCTTTAA AATCGGAGCT TTTGGTTTGT TTTGCCTACG GTAAAATTTT CGGACCTAAG 
ACTATGGCTC TTTTTCCGCT GGGCGGAATA AATATTCATC CCTCTCTTTT ACCAAGGTGG 
AGGGGGCCGG CCCCTGTTCC TGCGGCCATA TTGGCGGGAG ATAAACTTAC CGGAATTACG 
ATTCAGACCC TTGCTCAAAA AACGGATTGC GGAAGTATTT TGGGACAGCT TGAAATTCCC 
TTAAATGATT CCGAAACAAC GGAAAGCCTT TTAGCCGATT GTGCCGATAA GTGCTGCCCG 
CTTTTACGTG ATGTGCTTTC GGATTTTGAA AACAAATTAA AGCAGGCAAG GCCTCAGGAA 
GAGGCAAAAG CTCTTTATTG CTCAATGTTA AAAAAAGAAG ACGGGCTTAT AGATTGGTCA 
AAGCCGGCTG AAGAAATTGA AAGAAAAATA AGGGCATTTA CCCCATGGCC GGGCTGCTTT 
ACCTTTAAAA ACAGCGAAAA AATAAGCATA ATTGAAGCTA ATTTATATGA AGATGCTTCA 
AATGAAATGA CAAAAAATAA AAAATTTGGT ACAATACTGG GTACCGATAA GAAATGCGGT 
ATTTTAATTC AAACAGGAAA TGGAATACTC GCTGTTTCGG TATTACAAAA GCAGGCAAAA 
AAAAAGCTTG AATGGAAGGA TTTTTTAAAC GGCTCTCCGG ATTTTTTGGA AGGCGGTTTT 
GAAACATAA
 
Protein sequence
MRILFAGTPS CAVPALNLIA REFDLCGVLT NPPAPAGRNK KMQDSDTALA VKELIKEGVL 
PENFPILTPQ KLDDNYRKEL EALKSELLVC FAYGKIFGPK TMALFPLGGI NIHPSLLPRW 
RGPAPVPAAI LAGDKLTGIT IQTLAQKTDC GSILGQLEIP LNDSETTESL LADCADKCCP 
LLRDVLSDFE NKLKQARPQE EAKALYCSML KKEDGLIDWS KPAEEIERKI RAFTPWPGCF 
TFKNSEKISI IEANLYEDAS NEMTKNKKFG TILGTDKKCG ILIQTGNGIL AVSVLQKQAK 
KKLEWKDFLN GSPDFLEGGF ET