| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1643 |
|---|
| Symbol | |
|---|
| ID | 2739752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1693649 |
|---|
| End bp | 1694641 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637160526 |
|---|
| Product | PASTA domain-containing protein |
|---|
| Protein accession | NP_972249 |
|---|
| Protein GI | 42527151 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTTG GTGATATTGC AGACAGCATA GAAAGTAACG GAAAAGTGAT AGTTATTACT
TCTTTAGTAA TGCTTGTGTT TTTTATTATT GTTTCTACAA TCGTGTTTTT TATGTCGGTA
AAAACGGCCG ATCAAGTTTT GGTTCCTAAT ATCGAAGGCG AAAAATTTGA AGATGCGGTT
CTTAAACTAC AGGTTAAAGA ACTCTATCCT CGTCTTCAGT TAAGATTTTC GGATAATACC
GAAGATGCAG GGACGGTTTT AGAGCAAAGC CCTCCTGCAG GAACTATCGT TAAAGCCGGA
AAAAGAATAA CTGTCACTGT AAGCAGTGGT GCCGTTCTTG ACAGAGTAGA AAATTATGTG
GGAAAAACCT TATCGGAGGT TCAACAGCAT TTTGCCTCTC TTTTTACTTC AGGCCGTAAA
CAGTTGATTT CGATAAAAGA ACCGATTATG TACAAATCAA GTTCAATTCC TGCCGGTACG
ATTTTGGAGC AAAATCCCGC TCCGGATACA AAGATATCCG AAGGCGTTTT TATTGAATTT
ATTGTAAGCA AGGGCCCTGA AAATGAGAAG GTTTCCGTTC CAAACATGGA AGGGCTTAAA
CTTGACGATA TTTATTCTGC AATAGCTCAA AGTAAAATTT CATTTGTAAT AAAAGCCGAA
GTCAATTCTT CTCTTGATGC CCCGGTTGTT GTCAGTCAAA GCCAGCCGGC AGATTCCTCT
ATAGATGCTT ACTCTCAAAT AGAATTAGGT ATGCAATTCC CCGATTCTAC CGAAAAAATG
GTTTACGGTG TTTATTCGCC TGCTTTACCT AGATATCCTT ATCCGGTAAA AGTTACGGTT
GATGCCGTAT ATCCTGACGG AAAGAGAAAG GAGCTTATAA GTTTTAATCA TCAGGGAGGA
AAATGCAGCA TTCCTTACGG TCTTCCCCAA GGGACGGTTC TTGTTCTAAC CGTATTAAAC
AAACAGGTTC AAATGTTTGA AGTAAAACAA TAG
|
|---|
| Protein sequence | MGLGDIADSI ESNGKVIVIT SLVMLVFFII VSTIVFFMSV KTADQVLVPN IEGEKFEDAV
LKLQVKELYP RLQLRFSDNT EDAGTVLEQS PPAGTIVKAG KRITVTVSSG AVLDRVENYV
GKTLSEVQQH FASLFTSGRK QLISIKEPIM YKSSSIPAGT ILEQNPAPDT KISEGVFIEF
IVSKGPENEK VSVPNMEGLK LDDIYSAIAQ SKISFVIKAE VNSSLDAPVV VSQSQPADSS
IDAYSQIELG MQFPDSTEKM VYGVYSPALP RYPYPVKVTV DAVYPDGKRK ELISFNHQGG
KCSIPYGLPQ GTVLVLTVLN KQVQMFEVKQ
|
|---|
| |