Gene TDE1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1632 
SymbolcitE 
ID2739741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1681659 
End bp1682528 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID637160515 
Productcitrate lyase, beta subunit 
Protein accessionNP_972238 
Protein GI42527140 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA GAAGAAGTAT GCTTTTTATG CCCGGTAATA ATCCGGGAAT GTTGGTATCG 
GCCGATATTT TGGGAGCGGA TTCCATCATT TACGATTTGG AAGATGCCGT TTCCCTTGAT
GAAAAAGACT CGGCCCGTAC TCTGGTGCGG AATGCTCTTT CCTTTTTAAA GTTTACCCAT
TCCGAAATAA CTGTAAGAAT AAACCCCATC GACTCCCCTT ATTGGGAAAA GGACTTGGAG
GCAATTATCC CCGTTCTTCC CGATGGAATC GTAATTCCTA AGGCTTCGGT CGATGCCGTT
CACTCGGTTG AGCAAAAAAT AAACGAGATA AAAAAGGCTC ACAATATCAC TAAGAATTTC
AGCTTTCTTA TGCTGGTAGA ATCAGCCCGC GGAATTATGG ATGTAAATTC GATAGCCAAG
GCCTCATCGC TGATTCAAGG CCTTCTTTTA GGCGGCGAAG ATTATTCGGT CGATATGGGG
ATTCAGCGTA CCCGTCTTTC AAAAGAACTG GAATACGCCC GCTTTAGTTT GACGACAGCC
GCCCATGCCT ATGGTTTGGA CTCCCTTGAT ACCCCCTTTA CGGATGTAGA AGACTTTGAG
GGCCTAAGGC TCGATACGGC CTTTAGTAAG AGCATAGGAT TTTCGGGCCG CTTGGTTATC
AATCCGCGTC AGGTCGAAGA GATTCATAAA ATATTTTCTC CTTCAAGTGC CGAAATTGAA
AGAGCCGAGG CTATTTTACA GGCTGCGGAA GAAGCCAAAC AAAAGGGCTT AGGCGTATTC
AGCTTTAAGG GAAAGATGGT CGACTTACCG GTTATCAAGA GGGCTCAAGC TCTTTATGAT
TCTGCCAAAA ACTGGGGCTT GATAAAATAG
 
Protein sequence
MKNRRSMLFM PGNNPGMLVS ADILGADSII YDLEDAVSLD EKDSARTLVR NALSFLKFTH 
SEITVRINPI DSPYWEKDLE AIIPVLPDGI VIPKASVDAV HSVEQKINEI KKAHNITKNF
SFLMLVESAR GIMDVNSIAK ASSLIQGLLL GGEDYSVDMG IQRTRLSKEL EYARFSLTTA
AHAYGLDSLD TPFTDVEDFE GLRLDTAFSK SIGFSGRLVI NPRQVEEIHK IFSPSSAEIE
RAEAILQAAE EAKQKGLGVF SFKGKMVDLP VIKRAQALYD SAKNWGLIK