Gene TDE1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1627 
SymbolgcvT 
ID2739736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1675428 
End bp1676501 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content42% 
IMG OID637160509 
Productglycine cleavage system T protein 
Protein accessionNP_972233 
Protein GI42527135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA CACCCTATTA TGAAACCTTG CTCGCTAAAG GCGGCAAGTT TGTTGAGTTC 
GGCGGATATG AAATGCCCAT TCAGTTTGCC GGTATCTTAA AAGAGCATCT TGCAGTTCGC 
AATAATGTAG GACTTTTTGA TGTTTCACAT ATGGGAGAGT TTTATATTGA AGGCGACAAT 
GCCGAAGCTG CCGTAAATGC CCTTATTACA AACGATATTC GCGGAATGGC TGACGGAGAT 
GTACGCTACA CCCTTATGTG TAACGAAAAG GGCGGAATCG TAGATGACTT CCTTGTTTAC 
CGCTATAATC AAAAGAAATT CCTTTTGGTT GTAAATGCCG GAAACCATGA CAAAGATTAT 
GACTGGGTAA AAAAGCATTT GGATAAGAGC GTTACCTTTA CTGACCGATC TTCCGAAATT 
GCCCAGCTTG CAATTCAAGG CCCCAATGCT CCTGCTGTGG TAAAAAAGTT TATTGCTCCT 
TCTGCAATGC CCTCCGCTTA CTACACCTTT AAGACCTTCC AGTGCCCCAA GGGAGAAGTA 
ATCGTTTCTC AGACAGGTTA TACCGGTGAA GACGGTTACG AAATCTACTG CCCCAAAGAA 
TGGGCTCTTG AGCTTTTCAA TCAAGTTATG AAAGCAGGAG AAGAATTCGG AATAGAGCTT 
TGCGGTTTAG GCTGCCGAGA CACCTTGCGC CTTGAAGCCG GTATGCCCTT GTACGGCCAT 
GAAATGACCG AAGAAACCTT GGCAACCGAA GTAACATTAA AGCCCTTTAT CAAACTTGAA 
AAAGAAGACT TTATCGGTAA AAAAGCTCTT GAAACCAACG AAGCCAAAAA AATCCGAAAA 
GGCTTTAAGA TGATTGACAG AGGTATTGCC CGCGATCATG ACAAAGTTTT CTTAGGCGAC 
AAGGAAATCG GTTATGTTAC AACCGGAACT TCTTCACCCT CATTAAAAGT CGGTATCGGA 
CATATGAGAA TCGATAGAGG CATTAAAGAT GAAGAAGTCC TTATCGAAGT ACGAGGTAAA 
AAACTAAAGG CTAAAATCGT GCCTACGAGC TTCTTAAAAG AAATTAAGGG CTAA
 
Protein sequence
MKRTPYYETL LAKGGKFVEF GGYEMPIQFA GILKEHLAVR NNVGLFDVSH MGEFYIEGDN 
AEAAVNALIT NDIRGMADGD VRYTLMCNEK GGIVDDFLVY RYNQKKFLLV VNAGNHDKDY 
DWVKKHLDKS VTFTDRSSEI AQLAIQGPNA PAVVKKFIAP SAMPSAYYTF KTFQCPKGEV 
IVSQTGYTGE DGYEIYCPKE WALELFNQVM KAGEEFGIEL CGLGCRDTLR LEAGMPLYGH 
EMTEETLATE VTLKPFIKLE KEDFIGKKAL ETNEAKKIRK GFKMIDRGIA RDHDKVFLGD 
KEIGYVTTGT SSPSLKVGIG HMRIDRGIKD EEVLIEVRGK KLKAKIVPTS FLKEIKG