Gene TDE1620 details

Gene Information

• Locus tag: TDE1620
• ID: 2740861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1667049
• End bp: 1669052
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637160502
• Product: hypothetical protein
• Protein accession: NP_972226
• Protein GI: 42527128
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATAA CAATAACAAA TGAAGATATT GAATATGCAG AGAAAATCTT GCTTCCTGCA 
AATAAGCATT TTGATGAAGA ACGCCGAAAC TTTATCACTA ATTTAGATAC TATTGACCTA 
CAAGCGGTTC CCGGAAGCGG TAAAACAACA GCACTGTTGG CAAAACTTAT CATTTTAGAA 
AAGAAAATGC CGTTTCCTGA CGGTTCGGGT GTACTTATTC TTTCTCATAC AAACACAGCA 
GTTGAAGAAA TACAGTCTAA ATTACAAACT ATCGCCCCGA AACTGTTTAA CTTTCCTAAT 
TTTGTCGGAA CAATACAAAG CTTTACCGAT ACTTTTTTGG CACTTCCCTA TTATGCCCAT 
GTTCATAAAA CACATCCCTA TCGAATAGAT GATGACATAT ATTTTAGGAG GTGCGAGTTA 
GCTCTTAAAT ATAAATACAG TAGCTTGACG TGGTTCAGCT ATCGACCTCA CAAGGTTCAA 
ATGACAACTT TACTAACCGC TAAAATCGAT CAAAACGGTT GTGCAAAATG TATTAATGGG 
TTAAAGAATC TTAAATGCTC TACAGCAATA AAGATTGCAC AATTTAAGTA TGATAATGTG 
AAAAAAGGCT TTTTAACATA TAATGATGCA TTTGAATTTG CAAATTTCTA TATTAATGAT 
AATCCGCGGA TAGTAAGTAT TTTCCAAAAA AGATTTAAGT ATGTATTTGT TGATGAAATG 
CAGGATATGC ACAGTCATCA AATAAAGCTA TTGGATGCGT TATTTTACAC ATCAGGACAT 
ACAGATGAAC AACAAACTAT AACGGTATTT CAACGTATAG GAGATGTAAA TCAAAGCATT 
TTTGGAGAAA ACGATAGTGA TAATAGTGAT GGTTCTACTG AGAAAGCTGA TAATTCCGGT 
AAGGCGGATT GGAAGCCGCG AGAACACTTA ACATTACTCG GAAGTCATCG GCTTTCTCCT 
TGTACTGCTG CCATTGTGTC ATCATTTGCC GTAGAACCTA ATGCGATACA AGGACTCAGA 
AAAAATGCAG ATGGAACAGC TATAGATATT AAACCCTATC TTTTCGTGTA TAAAAAAGAG 
AATATTAAAA CGGTTATTAA GAAATTTGCT CATCTTATTT ATAAACTACA AAATGAAGGA 
AAACTGCCGA TGACAGGAAG TTATGCTGCC GTTGGCTGGC GGAAATCTAT TTTAGATGAC 
GCCGCAGACA ATAAACTTGG AATTTCCGAT TACTATGATT CTCTTTGTGC AGCAGCTGCA 
TCAACTAAAA TTAATTACAG CTCTCTTACA GATCATTTAC TCGCAGTTGA TCCTCATAAA 
AAGCACTTAG AAACAATGAG AAAGTCTATT TTAAATGCAT TATTACATAT ACTTTATATG 
CAAAAAATAC AAGATAAGCA TGGACGCTAT TATACAATAA GAACATTATT CAAATACCTC 
AAAGAAGAAA CCGATATATA TGAACTATTT AAGCGAAACC TTTTTCGTTG GTGCAAGCAA 
CGGATCAATA GTGAACCTGT AGAGCAGACT ATTCACAATA TACAAGCATT TCTACCTGAT 
TTTTTGCAAG CGGTATCATT AGATAATAAT CTCATAAATA TAAATAATGA CACGTATTTG 
TTTATAACAA ACCCTACAAC TATAATCCAG AATAATAAAC CAACAGGTCA AGAGCAGATA 
AATACATACA GTATTTCAGG AATTGATATT TCCATCAAAA CCGTTCATGC AATAAAAGGT 
CAAACAGTAA CCGGTCTGCT TTATATGGAA ACATATAATT CAAGTATGCA CGAATCAAAT 
AGGCTTGTCG ACTGTTTTAT ACATAAAAAA TTTCGTAAGA CTGCCAAAAC AAAAAAATCC 
GGTATGATGT ATAAAGCCGC AAAAACAGTG TATGTCGGGT TCTCCAGACC AACTCATTTG 
CTTTGTTTTG CTGTACAAAA AGAACGATTT GATAAGTACC TTTCCAATAT TGATAGAGCT 
GTATGGGATA TTATTGACAT ATAA 

 

Protein sequence

MQITITNEDI EYAEKILLPA NKHFDEERRN FITNLDTIDL QAVPGSGKTT ALLAKLIILE 
KKMPFPDGSG VLILSHTNTA VEEIQSKLQT IAPKLFNFPN FVGTIQSFTD TFLALPYYAH 
VHKTHPYRID DDIYFRRCEL ALKYKYSSLT WFSYRPHKVQ MTTLLTAKID QNGCAKCING 
LKNLKCSTAI KIAQFKYDNV KKGFLTYNDA FEFANFYIND NPRIVSIFQK RFKYVFVDEM 
QDMHSHQIKL LDALFYTSGH TDEQQTITVF QRIGDVNQSI FGENDSDNSD GSTEKADNSG 
KADWKPREHL TLLGSHRLSP CTAAIVSSFA VEPNAIQGLR KNADGTAIDI KPYLFVYKKE 
NIKTVIKKFA HLIYKLQNEG KLPMTGSYAA VGWRKSILDD AADNKLGISD YYDSLCAAAA 
STKINYSSLT DHLLAVDPHK KHLETMRKSI LNALLHILYM QKIQDKHGRY YTIRTLFKYL 
KEETDIYELF KRNLFRWCKQ RINSEPVEQT IHNIQAFLPD FLQAVSLDNN LININNDTYL 
FITNPTTIIQ NNKPTGQEQI NTYSISGIDI SIKTVHAIKG QTVTGLLYME TYNSSMHESN 
RLVDCFIHKK FRKTAKTKKS GMMYKAAKTV YVGFSRPTHL LCFAVQKERF DKYLSNIDRA 
VWDIIDI