Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1616 |
Symbol | hprA |
ID | 2740857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1663845 |
End bp | 1664813 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160498 |
Product | glycerate dehydrogenase |
Protein accession | NP_972222 |
Protein GI | 42527124 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AATTAAATTT GGTTATTCTT GACGGGTTTA CTTCCAATCC CGGAGACCTT TCGTGGGATG AGTTAAAATC GGTTTCAAAT CTTACAATAT ACGATAAAAC AAGTGCAGAG GAACTTCTTG AAAGGTGTAA GGAGGCTGAT GCCGTTCTTA CCAATAAGGT TGTTTTTTCT AAAGAAATAA TGGATTCTTT GCCACGTCTT AAATATATAG GAGTTTTAGC TACCGGATAC AATGTTGTCG ATATTGAGGC TGCAAGAGCT AAAAATATCT GTGTAACGAA TATTCCCTCT TACAGCACCG ACAGCGTGGC TCAACTTGTA TTTGCCCTTA TTTTTCACTT TTATTGGCAT GTAAAGGAGC ATAGCGATGA AGTTATGGGC GGAAAATGGT CGGCGTCCCC TCATTTTTGC TATCATAGCT TTGATATAAG GGAGCTTTCC GATAAGACTA TGGGTATAGT CGGCTTTGGG AACATAGGCC AAGCCGTTGC AAAAATTGCC CTTGCCATGA ATATGAAGGT AATCTATTTT AACCGCTCTA AAAAAAATAT TAAGGGCTTA GAAGAAGCAA AACAAGTTTC TTTAGATGAG CTTTTTTCTT CTTCCGATAT AATAAGCTTA AACTGTCCTT TGACTCCGGA AACAAAAGAA ATTATAAATG CCGAGTCCTT AAAAAAGATA AAAAAAACTT CCATTGTAAT CAATACGGGA CGGGGCCCTC TTATAAACGA AAAGGATGCA GCAGAGGCTT TAAAGGAAAA AAGACTTGCA GGTCTTGCCT GCGATGTTCT CAGTGTAGAA CCTCCGGCTA AGGATAATCC CTTGCTTAAA GCTCCGAACT GTATTATTAC GCCACACATG GCATGGCAAA CCTTTGAGGC CAGAGAGAGG CTTATAAAAA CAGCTGCAGC TAACGCAAAA GCCTTTATAG CCGGAAAAGA AATAAACAGG ATTAATTAG
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Protein sequence | MSEKLNLVIL DGFTSNPGDL SWDELKSVSN LTIYDKTSAE ELLERCKEAD AVLTNKVVFS KEIMDSLPRL KYIGVLATGY NVVDIEAARA KNICVTNIPS YSTDSVAQLV FALIFHFYWH VKEHSDEVMG GKWSASPHFC YHSFDIRELS DKTMGIVGFG NIGQAVAKIA LAMNMKVIYF NRSKKNIKGL EEAKQVSLDE LFSSSDIISL NCPLTPETKE IINAESLKKI KKTSIVINTG RGPLINEKDA AEALKEKRLA GLACDVLSVE PPAKDNPLLK APNCIITPHM AWQTFEARER LIKTAAANAK AFIAGKEINR IN
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