Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1606 |
Symbol | |
ID | 2740847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1656271 |
End bp | 1656948 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637160488 |
Product | TetR family transcriptional regulator |
Protein accession | NP_972212 |
Protein GI | 42527114 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.912424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAACG GAGATTTTGA CCTTACGCAT AAGAAAATTC TGGAATGCGG GAAAAAGATT TTCAAAGAGA AGGGCTTTGA AAAAGCCAAT CTGCGGGAAA TCTGTGCGCA GGCGGGTGTT ACGACCGGAG CCTTTTACGG TCATTTTAAA GACAAAGAAG CTCTTTTTTC CGAATTGGTA CAGCCGGTCA TTACCGATAT AGAGTACCAT TATAGCTTGC TCAAACAACA AAGTTTTACA ATGTATAAAA AAGAAACGGT GATCACAAAA CAAACAATCG AATCCATTCT CGATTTAAAA TTAAAGGGAG CCGTCGGTAT GGTATCCTAT TTTTTTGATA ACAAAGATAT TTTCGAGCTC TTGGCGTTTT GTTCTTATGG AACAAAACAT GAGCATTTTT TAGATGAAAT AATAGAAAAA GAAGATGAAA ACCACCTGAA AATCTTGGAG ATGATTCACG GGAAAAAGAA GGCCGCTCAA GTAATCACCA AAAAAGGCAT TCACTTACTG AACCATGCAT ACCTGTATGC ACTATCGGAA GTTGCCGTTC ATTGCGAAAC AAAAGAAGAA GCCGAACACA ATGCCTATTT AATTGCGGAC TTCTTTAATG AAGGCTGGAA AAAAATGCGC ACAGGGCAAT TTAATTATGA ATTAAAACTC ATTTATAATT ATGAATGA
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Protein sequence | MGNGDFDLTH KKILECGKKI FKEKGFEKAN LREICAQAGV TTGAFYGHFK DKEALFSELV QPVITDIEYH YSLLKQQSFT MYKKETVITK QTIESILDLK LKGAVGMVSY FFDNKDIFEL LAFCSYGTKH EHFLDEIIEK EDENHLKILE MIHGKKKAAQ VITKKGIHLL NHAYLYALSE VAVHCETKEE AEHNAYLIAD FFNEGWKKMR TGQFNYELKL IYNYE
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