Gene TDE1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1601 
Symbol 
ID2740842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1652479 
End bp1653126 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content35% 
IMG OID637160483 
ProductTetR family transcriptional regulator 
Protein accessionNP_972207 
Protein GI42527109 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCATATT GTTCGGACAT AACTAAAAAC AGAATTTTGG AATGCGCTAA AGAAGAGTTT 
TTACGGAATG GTTTTGAAAA AGCACAGGTG GGGGAGATTG CGAAAACGGC GAATGTAACC 
ACAGGTGCAA TATACCGTCA CTTTAAGAAT AAGGAAGAAC TGTTTTTTAC ACTTATTGAA 
GATGTATATG AGTACACATT AGATATCGTA ACGGATGTTG AAATTAGAAG TACTGATAAA 
GCGTCTATGC CGCTATCGGA AGAAACTGAC AATGTTGTTA TTGAAGCATT ATTTTCTGAA 
ACCATGAGGT TTGTAGATTA TATGTATGAG CATTTTGATG AGTTTAAGCT GCTTCTTGCC 
TGCAGTAAAG GTTCACGGGT AGAAAATTTT GCGGAAGAAA TTGCAGATAG ATATACGCAT 
AAAAATATGA AGCTCATTCA AGCCACAGCC GGCAAAAAAT CTTCTGCAAC CAAAATTAAA 
GAACTTGAGG TACATATCAT TACGAAAGGT TATATAACGT CATTATGTGA ATGTATCATT 
CACGCTATTC CATACAATGA TGTGAGCAGG TACATCAAAA GCATTGTTAC TTTTCAATAT 
TATGGTTGGG GCGGCTTATT AAATGAATTG AGGATATATC ATGAATAA
 
Protein sequence
MSYCSDITKN RILECAKEEF LRNGFEKAQV GEIAKTANVT TGAIYRHFKN KEELFFTLIE 
DVYEYTLDIV TDVEIRSTDK ASMPLSEETD NVVIEALFSE TMRFVDYMYE HFDEFKLLLA 
CSKGSRVENF AEEIADRYTH KNMKLIQATA GKKSSATKIK ELEVHIITKG YITSLCECII 
HAIPYNDVSR YIKSIVTFQY YGWGGLLNEL RIYHE