Gene TDE1594 details

Gene Information

• Locus tag: TDE1594
• ID: 2739791
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1643083
• End bp: 1644912
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637160476
• Product: putative glutamate synthase (NADPH) small subunit
• Protein accession: NP_972200
• Protein GI: 42527102
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCGAC TTGAGATATT TTCACAAAAC CGGTCTCAAA TTATAATTGA AGAACTGTAT 
GAGAATCTTC AACATCGAAT TGAAGCAAGT CCTCCCGGAC TTTGTCCCGT TTACATAACA 
CGAGCCTTTA TTGAAATGTG TCATGCCCAA ACTTGCGGAA AATGTGCACC ATGCCGTATC 
GGCCTTTTAC AGTTAAAGCA TATTTTAACT GATGTCCTAA ACGGAAAATC AACAATGAAA 
ACCCTTGATC TTATTGAAGA AACTGCTAAA TCTATAAGGG AAACAGCAGA CTGTGCACTG 
GGGTATGAAG CAGCCGATAT GGTTTATAAA AGCATAATCT ATTGCCGTGA TGACTTTGAA 
GAACATATAA AACACGGAAG ATGCGGCTGT ATAACAACTC AGCCCGTACC CTGTGTAGCC 
CTCTGTCCTG CAAATGTGGA TATTCCGGGC TATATTGCCC TTGTCAGGGA TGAAAGATAT 
GCCGATGCCG TCCGCTTAAT CAGAAAGGAC AATCCTTTTC CTTCTACATG TGCCTTTATC 
TGTGAACATC CTTGCGAACA TAGGTGCCGT CGAAATATGG TAGACACCGC AATAAATATA 
AGAGGATTAA AAAGGGTTGC CGTTGAATTT GCCGGAAAAG TTCCGCCTCC CCCATGTGCA 
CCCTCTACAG GAAAATCGAT CGCCATAGTC GGAGGAGGGC CTGCCGGGCT TACCGCGGCT 
TATTATTTAC AGCTCATGGG ACATCAGACA ACCGTATATG AGATGCTGCC CAAATTAGGA 
GGGATGCTCC GTTACGGTAT ACCTAATTAC CGTCTCCCTA AGGACAGATT GGACGAAGAT 
ATAGATGCAA TTCTTGAAAC CGGAGTTAAA GTCGTTTACG GTAAAAAAAT AGGAACCGAT 
ATAGAACTCA ATGAACTTAT AAAAGATAAT GATGCGGCTA TAATAGCAAT TGGAGCCTCA 
ACCGACAAAA AGCTGGGCCT TGAAGGAGAA GATTCGGAAG GCGTTATCTC TGCTGTTCAA 
TTCCTTAGAG ATGTGGGAAT GGATAAGGGC ATGGATTTAA CAGGTAAAAA AACTGCAATA 
ATAGGAGGCG GAAATGTTGC CATGGATGCA GTGCGTACTG CTGTCCGTCT AAAATCGGAA 
AAAGTTACCT GTCTTTACCG AAGGCGTGTA GCCGATATGA CGGCTCTTCC TGCCGAAATA 
GAAGGAGCCT TAGCCGAAGG GGTAGAAATG ATGACCCTAA AAGCTCCTTC AAAACTTGAA 
GTAAAGAATG GAAAACTCAC AGGCGTTTGG GTTACTCCTC AGATGATTTC CAAAATAAAA 
GACGGGCGAG CCTCCGTTGT ATCTACAGGA GAACCTGATA TTTTTATTCC GTGTGAAGTG 
CTTGTCGTTG CAATAGGTCA GGATATCGAA ACTCAACATT ATGAAGATTC CGGTATACCG 
GTTGATCGAG GAAAGCTTTT TACCATGCCC AGCGCAAGTT TTCAAGGAAT GCCTGGCCTA 
TTTTCAGGCG GAGACTGTGC TTCAGGCCCC GCTACGGTTA TAAAGGCCAT TGCCGCCGGA 
AAAGTTATGG CCGCAAATAT AGACGAATAT TTAGGCTATA GCCACACTAT AAGCTGTGAT 
ATAGAAATTC CCATTCCCAA TATTGATGAC CGCCTTGCTT GCGGAAGGGT TGAACTTGGA 
GAGAGGGAAG CTTCTGAAAG AATAAAGGAT TTTGAAGGCG TAGAATTCTG TATGAGTAAA 
AAGGAAGCTT GTCAAGAATC AAATCGCTGT CTTAAATGCG ATCACTTCGG ATTTGGTATA 
TTTAAGGGAG GACGGGAACG ATTATGGTAA 

 

Protein sequence

MSRLEIFSQN RSQIIIEELY ENLQHRIEAS PPGLCPVYIT RAFIEMCHAQ TCGKCAPCRI 
GLLQLKHILT DVLNGKSTMK TLDLIEETAK SIRETADCAL GYEAADMVYK SIIYCRDDFE 
EHIKHGRCGC ITTQPVPCVA LCPANVDIPG YIALVRDERY ADAVRLIRKD NPFPSTCAFI 
CEHPCEHRCR RNMVDTAINI RGLKRVAVEF AGKVPPPPCA PSTGKSIAIV GGGPAGLTAA 
YYLQLMGHQT TVYEMLPKLG GMLRYGIPNY RLPKDRLDED IDAILETGVK VVYGKKIGTD 
IELNELIKDN DAAIIAIGAS TDKKLGLEGE DSEGVISAVQ FLRDVGMDKG MDLTGKKTAI 
IGGGNVAMDA VRTAVRLKSE KVTCLYRRRV ADMTALPAEI EGALAEGVEM MTLKAPSKLE 
VKNGKLTGVW VTPQMISKIK DGRASVVSTG EPDIFIPCEV LVVAIGQDIE TQHYEDSGIP 
VDRGKLFTMP SASFQGMPGL FSGGDCASGP ATVIKAIAAG KVMAANIDEY LGYSHTISCD 
IEIPIPNIDD RLACGRVELG EREASERIKD FEGVEFCMSK KEACQESNRC LKCDHFGFGI 
FKGGRERLW