Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1594 |
Symbol | |
ID | 2739791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1643083 |
End bp | 1644912 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637160476 |
Product | putative glutamate synthase (NADPH) small subunit |
Protein accession | NP_972200 |
Protein GI | 42527102 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGAC TTGAGATATT TTCACAAAAC CGGTCTCAAA TTATAATTGA AGAACTGTAT GAGAATCTTC AACATCGAAT TGAAGCAAGT CCTCCCGGAC TTTGTCCCGT TTACATAACA CGAGCCTTTA TTGAAATGTG TCATGCCCAA ACTTGCGGAA AATGTGCACC ATGCCGTATC GGCCTTTTAC AGTTAAAGCA TATTTTAACT GATGTCCTAA ACGGAAAATC AACAATGAAA ACCCTTGATC TTATTGAAGA AACTGCTAAA TCTATAAGGG AAACAGCAGA CTGTGCACTG GGGTATGAAG CAGCCGATAT GGTTTATAAA AGCATAATCT ATTGCCGTGA TGACTTTGAA GAACATATAA AACACGGAAG ATGCGGCTGT ATAACAACTC AGCCCGTACC CTGTGTAGCC CTCTGTCCTG CAAATGTGGA TATTCCGGGC TATATTGCCC TTGTCAGGGA TGAAAGATAT GCCGATGCCG TCCGCTTAAT CAGAAAGGAC AATCCTTTTC CTTCTACATG TGCCTTTATC TGTGAACATC CTTGCGAACA TAGGTGCCGT CGAAATATGG TAGACACCGC AATAAATATA AGAGGATTAA AAAGGGTTGC CGTTGAATTT GCCGGAAAAG TTCCGCCTCC CCCATGTGCA CCCTCTACAG GAAAATCGAT CGCCATAGTC GGAGGAGGGC CTGCCGGGCT TACCGCGGCT TATTATTTAC AGCTCATGGG ACATCAGACA ACCGTATATG AGATGCTGCC CAAATTAGGA GGGATGCTCC GTTACGGTAT ACCTAATTAC CGTCTCCCTA AGGACAGATT GGACGAAGAT ATAGATGCAA TTCTTGAAAC CGGAGTTAAA GTCGTTTACG GTAAAAAAAT AGGAACCGAT ATAGAACTCA ATGAACTTAT AAAAGATAAT GATGCGGCTA TAATAGCAAT TGGAGCCTCA ACCGACAAAA AGCTGGGCCT TGAAGGAGAA GATTCGGAAG GCGTTATCTC TGCTGTTCAA TTCCTTAGAG ATGTGGGAAT GGATAAGGGC ATGGATTTAA CAGGTAAAAA AACTGCAATA ATAGGAGGCG GAAATGTTGC CATGGATGCA GTGCGTACTG CTGTCCGTCT AAAATCGGAA AAAGTTACCT GTCTTTACCG AAGGCGTGTA GCCGATATGA CGGCTCTTCC TGCCGAAATA GAAGGAGCCT TAGCCGAAGG GGTAGAAATG ATGACCCTAA AAGCTCCTTC AAAACTTGAA GTAAAGAATG GAAAACTCAC AGGCGTTTGG GTTACTCCTC AGATGATTTC CAAAATAAAA GACGGGCGAG CCTCCGTTGT ATCTACAGGA GAACCTGATA TTTTTATTCC GTGTGAAGTG CTTGTCGTTG CAATAGGTCA GGATATCGAA ACTCAACATT ATGAAGATTC CGGTATACCG GTTGATCGAG GAAAGCTTTT TACCATGCCC AGCGCAAGTT TTCAAGGAAT GCCTGGCCTA TTTTCAGGCG GAGACTGTGC TTCAGGCCCC GCTACGGTTA TAAAGGCCAT TGCCGCCGGA AAAGTTATGG CCGCAAATAT AGACGAATAT TTAGGCTATA GCCACACTAT AAGCTGTGAT ATAGAAATTC CCATTCCCAA TATTGATGAC CGCCTTGCTT GCGGAAGGGT TGAACTTGGA GAGAGGGAAG CTTCTGAAAG AATAAAGGAT TTTGAAGGCG TAGAATTCTG TATGAGTAAA AAGGAAGCTT GTCAAGAATC AAATCGCTGT CTTAAATGCG ATCACTTCGG ATTTGGTATA TTTAAGGGAG GACGGGAACG ATTATGGTAA
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Protein sequence | MSRLEIFSQN RSQIIIEELY ENLQHRIEAS PPGLCPVYIT RAFIEMCHAQ TCGKCAPCRI GLLQLKHILT DVLNGKSTMK TLDLIEETAK SIRETADCAL GYEAADMVYK SIIYCRDDFE EHIKHGRCGC ITTQPVPCVA LCPANVDIPG YIALVRDERY ADAVRLIRKD NPFPSTCAFI CEHPCEHRCR RNMVDTAINI RGLKRVAVEF AGKVPPPPCA PSTGKSIAIV GGGPAGLTAA YYLQLMGHQT TVYEMLPKLG GMLRYGIPNY RLPKDRLDED IDAILETGVK VVYGKKIGTD IELNELIKDN DAAIIAIGAS TDKKLGLEGE DSEGVISAVQ FLRDVGMDKG MDLTGKKTAI IGGGNVAMDA VRTAVRLKSE KVTCLYRRRV ADMTALPAEI EGALAEGVEM MTLKAPSKLE VKNGKLTGVW VTPQMISKIK DGRASVVSTG EPDIFIPCEV LVVAIGQDIE TQHYEDSGIP VDRGKLFTMP SASFQGMPGL FSGGDCASGP ATVIKAIAAG KVMAANIDEY LGYSHTISCD IEIPIPNIDD RLACGRVELG EREASERIKD FEGVEFCMSK KEACQESNRC LKCDHFGFGI FKGGRERLW
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