| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1587 |
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| Symbol | aspS |
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| ID | 2739784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1634173 |
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| End bp | 1635945 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637160469 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | NP_972193 |
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| Protein GI | 42527095 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000320348 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA TGCAAAGAAC CGTAACCTGC GGCGGCTTAA ATAAGGATTT TGCAGGAAAA
ACTGTTGTTT TAAACGGCTG GATTCACCGA AAAAGGGATC ACGGCGGTAT TACTTTTTTA
AATTTACGCG ACCGTTACGG TTTGACTCAG GTAGTTGTGG ACGATGATGC AAGCGAAGAC
TTAAAAGCCC TTGCAGTAAG CCTCAAGCAG GAATTCTGTA TTGCCGTTGA GGGGCTTGTA
AGACCCCGCC CCGATTCTAT GATAAACAAA GAAATGGCAA CGGGAGAAAT CGAAGTTAAG
GCCTTAAAGA TTGAAGTGCT TTCAAAAAGC GAGGTGCTTC CTTTTCAGAT TGACGAAAAA
ACAAATGCAA ACGAAGATTT ACGGCTTAAA TACAGGTATT TGGACTTACG CTCAAAGGCT
ATGCAGGAAC ACATTATGTT GCGCTCCAAG TTTACCTTTG CTGTCCGCGA ATTTTTAACT
TCAAAAGATT TTTTGGAAAT TGAAACCCCG ACATTTATTA AGTCCACGCC GGAAGGAGCC
CGCGACTATC TGGTTCCCTC CCGCCTTTAT CCGGGAAAAT TCTATGCCCT ACCCCAATCT
CCGCAGATTT ATAAGCAGAT TTTAATGGTC TCCGGCTTTG ATAAATATTT TCAGATTGCG
CGCTGCTACC GCGACGAGGA TGCCCGAGGC GACAGACAGC CCGAGTTCAC TCAAATCGAC
CTTGAAATGA GCTTTGCTTC CCGCGAAGAT GTTTTAAGCT TAACCGAAGG AATGATGCAG
TATGCTTTTA AAAAGAGCAT AAATGTAGAC CTTCCTAAAA CATTTGAACG CATAAGCTAC
GATGAAGCTA TCGATATTTA CGGCACTGAT AAGCCCGATC TCCGTTTTGA AATGAAGATG
CAGGATGCAG CCTTTATGGC CGAAATCGGA AACTTTGCAG TTTTCAAAGA TGCCGTTTCT
TTAGGCGGAG CCGTCAAGGC CTTGGTTGTA AAAGGACAGG CGGAAGCCTA TAGCCGAAAA
AAAATTGAAG AGCTTGAAGC CGCAGCCAAA ATATACAAGG CTAAGGGCTT GGCTTGGATT
AAGGTAACGG AAGGCGGTGC AAAGCTTGAA GGCGGTGTTT CCAAATTCTT TGAAGGAAAG
GAAGCGGAAA TTTGCTCAAA ACTCGGAGCC GAAAAAGGCG ACTTAATTCT TTTTGTAGCC
GATAAGTACA AGATTGCCTG CACGGCCTTG GGCGCCGTCA GAAGCAAACT CGGAAAGGAC
TTAGGTCTTT TAAACCCTGC CGAATTTAAA TTTGCTTGGA TTGTGGACTT CCCCCTCTTT
GAATGGAATG AGGAAGAAAA CAAATGGGAC CCGGCTCATC ACATGTTCTC GGCTCCTCAA
GAAAAATATA TTGCAACAAT GGAAGAAAAT CCCGAACCCG TAAAAGGCGA TCTTTACGAC
CTGGTCTTAA ACGGATATGA GGTAGCCTCG GGCTCCATAA GAATCCATAA TCCCGAACTG
CAAAAGCGTA TCTTTAAGAT TGTCGGCTTT GACGAAAGCG AGGCGGAAAA GAAGTTCGGC
TTTTTAACGG AAGCCTTTAA ATACGGTGCC CCGCCCCACG GCGGCATTGC TCCGGGGCTT
GACCGCATAG TGATGATTAT GGCAGGCGAA ACATCGATAA AAGAAGTAAT CGCCTTCCCG
AAAAACTCTT TTGCAGTAAG CCCTATGGAC GACAGCCCCA GCGAAGTAGA CCAAAAGCAG
CTGGACGAAC TCCATTTGGT TATTAAGGAA TGA
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| Protein sequence | MEKMQRTVTC GGLNKDFAGK TVVLNGWIHR KRDHGGITFL NLRDRYGLTQ VVVDDDASED
LKALAVSLKQ EFCIAVEGLV RPRPDSMINK EMATGEIEVK ALKIEVLSKS EVLPFQIDEK
TNANEDLRLK YRYLDLRSKA MQEHIMLRSK FTFAVREFLT SKDFLEIETP TFIKSTPEGA
RDYLVPSRLY PGKFYALPQS PQIYKQILMV SGFDKYFQIA RCYRDEDARG DRQPEFTQID
LEMSFASRED VLSLTEGMMQ YAFKKSINVD LPKTFERISY DEAIDIYGTD KPDLRFEMKM
QDAAFMAEIG NFAVFKDAVS LGGAVKALVV KGQAEAYSRK KIEELEAAAK IYKAKGLAWI
KVTEGGAKLE GGVSKFFEGK EAEICSKLGA EKGDLILFVA DKYKIACTAL GAVRSKLGKD
LGLLNPAEFK FAWIVDFPLF EWNEEENKWD PAHHMFSAPQ EKYIATMEEN PEPVKGDLYD
LVLNGYEVAS GSIRIHNPEL QKRIFKIVGF DESEAEKKFG FLTEAFKYGA PPHGGIAPGL
DRIVMIMAGE TSIKEVIAFP KNSFAVSPMD DSPSEVDQKQ LDELHLVIKE
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