Gene TDE1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1548 
Symbol 
ID2740910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1591975 
End bp1592262 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content38% 
IMG OID637160430 
Producthypothetical protein 
Protein accessionNP_972154 
Protein GI42527056 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0355812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG CAAAAGAAAT CCAAGCAAAA ATTGCCAATA TTAAATCCGA CCTTGATCAA 
GAAGTTGTTG AAGGTGTATC GGGCGGAGGT CTTGTAAAAA TCCGCTTAAA AGGCAGTTTT
GAAGTTGAAT CTATCTTCCT TGATCCTATA GCTGTAGATA ATCGTGATGT TCCTATGCTT
CAGGATTTAG TCAGGGCTGC TCATAATGAT GCAGTGGCAA AACTAAAAGA ACTTTTACAA
AATAAACTTG GGCCCCTTGC AAGTCTTGCA GGCGGTTTAC CTTTTTAA
 
Protein sequence
MKNAKEIQAK IANIKSDLDQ EVVEGVSGGG LVKIRLKGSF EVESIFLDPI AVDNRDVPML 
QDLVRAAHND AVAKLKELLQ NKLGPLASLA GGLPF