Gene TDE1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1544 
Symbol 
ID2740906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1587294 
End bp1588406 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content37% 
IMG OID637160426 
Productmannosyltransferase, putative 
Protein accessionNP_972150 
Protein GI42527052 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATTG GAGTAGATGC ATTCGGATGT GATCACGGCC GCTCAGGCAT AGGCTCTTAT 
ATACTGTCTA TTGTAAAAAA TTTGCCTAAA AATGATTACG AATTCGAGCT TTTTGGTCCC 
GAACTTGATA AGTATACATA TACATCCGAC ATAGATTATG TTTCTTTTAC AGGTATAGAT 
ATTTCCGATA CAAAATTTTC GGAAAAAATT TGGCATTTTA AAAATTTAAA CTCTTTTATA 
AAAAAGCAAA GATATGATGC CGTCATTTAC CCTGCAGGGG TAGAACTTTT ACCTCCGATT 
TTTACCGTAC CTTCTATTTT GGTTATTCAA AGTCTTTTAT CTGCAGACCT TGGTACTATT 
GCAAAGATGG GCTTAAGGCG TACGCTTAAA AATGCCTCAG GCCTTATAAG TCCTACAAAA 
TACATTCAAA ACGATTTATC GCAATTTGGG GTAAACGCAT CCGACATAAA AGTAATATAT 
AACGGTATTG ACTGTTCTCT TTTTAAGCCC ATCACAAATG ATGAAGATAG GGTTTTAATA 
CAGCCCTTTG CAATTCAAAG ACCGTATATA ATTTATGCCT CCCGCATAAC ACATGAACAA 
AAATGCCATG TAGAATTGAT AAAGGCCTTT GCCCTATTTA AAAAGCAAAC AGGTTCTCCT 
CATCGTCTTG TTATTGCAGG TTCTGACGGA AATAATTCCG AAGCTGTTCA TAATGCGGTA 
ATACAATCGG GCTTTTCTTC GGATATTTTG CTTACAGGTT ATTTTCCTCA TGAAAGTCTT 
CCTCAGCTTT ATTCATCGGC AGACCTTTGT GTCTTTCCTT CGATGATAGA AGGAGTAGGC 
TTACCGGTTA TTGAAGCCAT GGCCTGCGGT GTTCCTGTTG CTTGTGCAAG GGCCGGAGCG 
CTTCCGGAAG TTGCAGGGGA TTCTGCTCTG TTTTTTAATT CAAAAAAACC AGAGGAAATT 
GCAGAAGCCA TTTCTTCTTT AGTCGATTGC GATAAAAATA CGGCAAAAAG AAAAGAAATT 
ATAGAGAAAG GTCTTGACTG GGTAAAAAAA TATAATTGGG AGACCACAGC TCATCAAACT 
ATCGAATACA TAGATTCTTT GCTAAAAAAA TAA
 
Protein sequence
MKIGVDAFGC DHGRSGIGSY ILSIVKNLPK NDYEFELFGP ELDKYTYTSD IDYVSFTGID 
ISDTKFSEKI WHFKNLNSFI KKQRYDAVIY PAGVELLPPI FTVPSILVIQ SLLSADLGTI 
AKMGLRRTLK NASGLISPTK YIQNDLSQFG VNASDIKVIY NGIDCSLFKP ITNDEDRVLI 
QPFAIQRPYI IYASRITHEQ KCHVELIKAF ALFKKQTGSP HRLVIAGSDG NNSEAVHNAV 
IQSGFSSDIL LTGYFPHESL PQLYSSADLC VFPSMIEGVG LPVIEAMACG VPVACARAGA 
LPEVAGDSAL FFNSKKPEEI AEAISSLVDC DKNTAKRKEI IEKGLDWVKK YNWETTAHQT 
IEYIDSLLKK