Gene TDE1522 details

Gene Information

• Locus tag: TDE1522
• Symbol: citC
• ID: 2739728
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1567920
• End bp: 1568948
• Gene Length: 1029 bp
• Protein Length: 342 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637160402
• Product: citrate lyase ligase
• Protein accession: NP_972128
• Protein GI: 42527030
• COG category: [C] Energy production and conversion
• COG ID: [COG3053] Citrate lyase synthetase
• TIGRFAM ID: [TIGR00124] [citrate (pro-3S)-lyase] ligase; [TIGR00125] cytidyltransferase-related domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAATT TACAAAAAAT TAACCTAGAG CTTAAAAGTC AAAAAGAAAA ATTTACAGCT 
CTTTTAAAAG AAAACGGCCT TATTGCGGAC TCCCTTGAAA GTGTTTACGG CATTTTTGAT 
GAAGCCGACA ATTTGGCCGC TTGCGGAGGG CGGGAAAAAA ATATCTTAAA ATGCTTTGCC 
GTAAAAGATG AATTTAAGGG TCTTGGTCTT ACCGACGAGA TTTTATCGGC CCTCTTAAAA 
GATGCTTACG GAGAAGGTTA TAAGTTCTTT TTTATATTTA CAAAAAGATC AAGCGTTTCC 
TTTTTTACGG GGGCAGGATT TATAAACTTA GCCTCATCGG ATGATTCTTC CTTATTATAC 
AGGGGAGAAA AAACCGTAGA GAAGGTTTTA AAGAATGAGC TTTTTCCTTA TTGCCCTGAC 
GGTATACTTG GCAGTATAAG CGATGAGGGA AATGCAGCTA TAGTTATGAA TGCAAATCCC 
TTTACCCTCG GCCACAGATA TTTAATAGAA AAAGCCTTAG ACTATTGCGG AAGTAAGAGC 
CGCCTTTTTG TTTTTGCCGT TGAGACAGAC AAAAGTTTTT TTTCTTTTAA TGACCGTTTT 
ATGCTTATCA AAAAAAATAC GGAAGACCTA AAAAATGTAG TAGTGCTTCC CTCATCTCAA 
TTTTTAATAA GCGGGGCGAC ATTTCCGTCC TATTTTTTAA AAGAAAAAAG TTTAATAAGC 
AAAAATCAAA CTCAGCTTGA TGCAAGGATA TTTTTAAAAT ACTTTGTACC TCTTTTTAAT 
ATTAAAATCC GCTTTTTGGG AGAAGAACCC TTAGATCCGA GTACCGAAAT ATATAATCAA 
ACTCTATTGA ATGAGCTTCC TCCTCAATGT GAGGTAAAAA TAATTGAGCG TAAAAAAACT 
CAAAATCAGC AAATCATTTC CGCAACGCAG GTTCGAAAGG CATTTCAAAA TAATAGTCTT 
GAAGAAGTAC GTTCCTTTTT ACCCGAAATA ACTTATAATT TTTTAAGGTC TTTAAAACAA 
AAAGACTAA 

 

Protein sequence

MTNLQKINLE LKSQKEKFTA LLKENGLIAD SLESVYGIFD EADNLAACGG REKNILKCFA 
VKDEFKGLGL TDEILSALLK DAYGEGYKFF FIFTKRSSVS FFTGAGFINL ASSDDSSLLY 
RGEKTVEKVL KNELFPYCPD GILGSISDEG NAAIVMNANP FTLGHRYLIE KALDYCGSKS 
RLFVFAVETD KSFFSFNDRF MLIKKNTEDL KNVVVLPSSQ FLISGATFPS YFLKEKSLIS 
KNQTQLDARI FLKYFVPLFN IKIRFLGEEP LDPSTEIYNQ TLLNELPPQC EVKIIERKKT 
QNQQIISATQ VRKAFQNNSL EEVRSFLPEI TYNFLRSLKQ KD