Gene TDE1521 details

Gene Information

• Locus tag: TDE1521
• ID: 2739727
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1567351
• End bp: 1567914
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637160401
• Product: fumarate hydratase
• Protein accession: NP_972127
• Protein GI: 42527029
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
• TIGRFAM ID: [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAGA TGAAAAAACT TACAACACCC TTTACAAGGG AAGATTTAAA AGATGTTAAG 
GCCGGAGATA TTGTTTTATT GAACGGCTAT ATTTATACGG GAAGAGATGC AGCTCACAAA 
CGCCTATGCG AACTTTTAGA AAAGGGAGAA AAACTCCCCA TAGATGTAAA GGGGGCTGTC 
ATGTACTATG TAGGACCGAG TCCTGCAAAG CCCGGAGAGC CCATAGGTTC TGCAGGGCCT 
ACAACCAGTT ACCGAATGGA TGCCTATACA CCTCAGCTTT TAGATGAGGG GCTTATGGCT 
ATGGTCGGAA AAGGAAAAAG AAACGATGAG GTAGTTGCAA AAATAATAGA ACATGGAGCT 
TGTTATTTTG CCGCCATCGG AGGAGCCGCT GCCTTGATTA AAAGCCGAAT TAAATCGGCC 
GAAGTTATCT GCTATGAAGA TTTGGGAGCT GAAGCTGTCC GTAAGCTCTA TGTTGAAGAT 
TTTCCCGTAA CCTGCATAAT CGATTCTAAG GGGAACAACC TTTATAAACT GGGACGCGAA 
GAATACTTAA AAAGCCTAAA CTAA 

 

Protein sequence

MSEMKKLTTP FTREDLKDVK AGDIVLLNGY IYTGRDAAHK RLCELLEKGE KLPIDVKGAV 
MYYVGPSPAK PGEPIGSAGP TTSYRMDAYT PQLLDEGLMA MVGKGKRNDE VVAKIIEHGA 
CYFAAIGGAA ALIKSRIKSA EVICYEDLGA EAVRKLYVED FPVTCIIDSK GNNLYKLGRE 
EYLKSLN