Gene TDE1516 details

Gene Information

• Locus tag: TDE1516
• ID: 2739722
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1563267
• End bp: 1563959
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637160396
• Product: ABC transporter, ATP-binding protein, putative
• Protein accession: NP_972122
• Protein GI: 42527024
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00103839
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTT TAACCTTAAC CGAAATTTCT AAAATATATG GAGATCTTAA AGCCCTCGAT 
AAAATAAATT TAACGGTTGA AGAGGGAGAG TGGCTTTCTA TAATGGGGCC TTCGGGTTCA 
GGTAAAACCA CATTGATGAA CATAATCGGC TGTATGGATA AGCCTTCTTT AGGAAAAATT 
GATTTGGCGG GTCAGGACAT TTCAAAGCTT TCTTCTAAAG AATTGACGAT AGTCAGGCGG 
GATATGATAG GCTTGGTTTT TCAACAATTT CACCTTGTAA ACTATCTTAC AGCCCTTGAA 
AATGTTATGA TGGCCCAGTA CTATCACAGC CTCCCGGATG AAAAGGAAGC TCTTGAAGCC 
CTTGAAAGTG TGGGTTTAAA AGAAAGAGCC AAGCATCTGC CCAATCAATT ATCGGGAGGA 
GAACAGCAGC GTGTCTGTAT TGCCCGTGCT CTGATAAATC ATCCCAAGCT CCTGCTTGCC 
GATGAACCTA CGGGAAACCT TGACGAAAAG AATGAAAAAC TTGTAATGGA AATTTTTGAA 
AAACTCCATA ATGCGGGAAG CACCATCATA GTTGTAACCC ACGATCCTGA GGTTGCAGAT 
CAGGCTGAAC GGATGGTTGT CCTTGAGCAC GGTAAAATAG CAAGAATTGA AAAAATGAGC 
AGGGTAAGAC CCTCAAGAGG AGAGAATGTA TGA 

 

Protein sequence

MNILTLTEIS KIYGDLKALD KINLTVEEGE WLSIMGPSGS GKTTLMNIIG CMDKPSLGKI 
DLAGQDISKL SSKELTIVRR DMIGLVFQQF HLVNYLTALE NVMMAQYYHS LPDEKEALEA 
LESVGLKERA KHLPNQLSGG EQQRVCIARA LINHPKLLLA DEPTGNLDEK NEKLVMEIFE 
KLHNAGSTII VVTHDPEVAD QAERMVVLEH GKIARIEKMS RVRPSRGENV