| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1514 |
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| Symbol | |
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| ID | 2739720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1560792 |
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| End bp | 1562069 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637160394 |
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| Product | permease domain protein |
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| Protein accession | NP_972120 |
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| Protein GI | 42527022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00243073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTGGA GAATGATAGC GGGGGCGCTT TTTAGACAAA AAGGAAAAAT GGTGATGATA
GCTTTTACCA TTGCCCTAGG TGCAAGTCTT TCAACTTCTA TGCTTAACAC AATGCTTGGT
GTAGGGGATA AGGTAAACCA AGAACTTAAA ACATACGGAG CCAATATCAA TGTTGCTCAT
AAAGAATCTT CTCTTTTAGA TGATATTTAC GGAGAAGAAT CCGGAAACAC AAAAAAATTC
TTAAAAGAAG ATGAATTGTA TAAAATTAAA ACCATATTTT GGGCATACAA TATTGTCGAT
TATGCACCTT TTTTAAATGT GCAAGTAGAT TATGACGGAG CGGATAAACC TGTCCGCCTG
TCGGGTACAT GGTTCGATTT TAGGATAGAC TTACATACGG GGCAGGAAGT TATAACCGGA
ATAAGAAGAA TGCGTACATG GTGGGAAGTA AACGGAAACT GGGTTTCGGA TGATGATAAT
TCTTCCTGTA TGGTAGGAAG TCTTTTTGCA GGAAGGAATA ACTTAAAAGT AGGGGACGAG
ATAAAACTTA CAAGTGCTGT AGCCTCTAAA ACTTTAAAAG TCTCTGCAAT TTTTAATTCG
GGAAGCAATG AAGATGAGGT AATTTTTACT ACATTGCATA CGGCCCAAGA ATTTTTAGGA
AAGACAAATG TTTGTGAAAG CATCGAGGTA AGTGCTTTGA CAACTCCCGA TAATGATTTG
GCAAGAAAGG CCGCAAGAAA CCCTTTAAGT TTAACTATAA AAGAAATGGA AATATGGTAT
TGCACCGCCT ATGTAAGCAG TATTTGTTAT CAGATTCAGG AGGTTATAAC GGATGCGGTT
GCAAAGCCGA TAAGACAGGT GGCCGAATCC GAAGGTGCTA TCTTAAATAA GACAAGCTTG
TTAATGCTTT TAATTACCGT TTTAAGTTTG ATCGCTTCGG CTCTCGGTAT TTCAAACTTG
GTAACGGCGA GTGTTATGGA TAGAAGGGCT GAAATCGGCT TAAAAAAAGC AATCGGGGCA
AGTAATACGG CCGTTACCGT TTCGGTTTTA ACTGAGGTTA TGGTAATAGG AATTATCGGC
GGTGCCGCCG GATATTTTGT AGGATTGGGT TTAACGCAGA TAATAGGCCG AAGCGTTTTC
GGTTCTGCAA TTCCGCCGGC TCCCATGGTT ATTCCTATTG TGGTACTTAT AATTTTTTTG
ATCACCCTTT TGGGAAGTCT TCCGTCGGTA AGATATTTAT TAAAGTTAAA CCCCACGGAA
GTTTTGCACG GAAAATAA
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| Protein sequence | MFWRMIAGAL FRQKGKMVMI AFTIALGASL STSMLNTMLG VGDKVNQELK TYGANINVAH
KESSLLDDIY GEESGNTKKF LKEDELYKIK TIFWAYNIVD YAPFLNVQVD YDGADKPVRL
SGTWFDFRID LHTGQEVITG IRRMRTWWEV NGNWVSDDDN SSCMVGSLFA GRNNLKVGDE
IKLTSAVASK TLKVSAIFNS GSNEDEVIFT TLHTAQEFLG KTNVCESIEV SALTTPDNDL
ARKAARNPLS LTIKEMEIWY CTAYVSSICY QIQEVITDAV AKPIRQVAES EGAILNKTSL
LMLLITVLSL IASALGISNL VTASVMDRRA EIGLKKAIGA SNTAVTVSVL TEVMVIGIIG
GAAGYFVGLG LTQIIGRSVF GSAIPPAPMV IPIVVLIIFL ITLLGSLPSV RYLLKLNPTE
VLHGK
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