Gene TDE1505 details

Gene Information

• Locus tag: TDE1505
• ID: 2739711
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1553754
• End bp: 1554197
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637160385
• Product: hypothetical protein
• Protein accession: NP_972111
• Protein GI: 42527013
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.121654
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATGGT GGTCTATCTG GCTTTTGGTA GGTGTGTTGT GTATAGGCTT GGAGCTTATA 
ATTCCCGGCC TTGTTATTAT CTTCTTCGGC TTCGGGGCTG TTTTTACTTC CGTTTTTAGT 
TTAATTCCTT TTATTAATCA AGCTCTTTGG CTTCAAATAA TAATATTTGT TATTTTTTCG 
GTTCTTTCTT TGGCTTTTTT ACGTAAAAAA TTTACTCCTA TTTTTAAGGG TACTATTTTC 
TATTCGGATA AAAAAAGCGA CAAAGAAGGG GAAGAGTTTG CCGATGTTAT TGAAACGGTT 
TTTCATAACA AGGAAGGCAG AATAAAGTAT CAGGGTACGA CATGGAGTGC CCGCTCTCTT 
TCGGAAGAAA TTCCTGCAGG CTCAATGGTG AGGGTTCTCA GACGCGAAGG GCTTACCTAC 
ATTGTTGAAA AGGCTGAAAA ATAA 

 

Protein sequence

MGWWSIWLLV GVLCIGLELI IPGLVIIFFG FGAVFTSVFS LIPFINQALW LQIIIFVIFS 
VLSLAFLRKK FTPIFKGTIF YSDKKSDKEG EEFADVIETV FHNKEGRIKY QGTTWSARSL 
SEEIPAGSMV RVLRREGLTY IVEKAEK