Gene TDE1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1496 
Symbol 
ID2739897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1540425 
End bp1543367 
Gene Length2943 bp 
Protein Length980 aa 
Translation table11 
GC content39% 
IMG OID637160375 
Productchromosome partition protein SmC, putative 
Protein accessionNP_972102 
Protein GI42527004 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTTA AAAATCTTGA AATTTTCGGA TTTAAGTCCT TTCCCGATAG AGTAAAAATT 
GAATTTGCAG ATGGTATAAC AGCCCTCCTG GGACCCAACG GCTGCGGAAA AAGTAATGTA
GTGGATGCAG TAAAATGGGT ATTGGGGGAA CAATCGTCCC GTACTTTACG GGCCGACAAA
ATGGAAGACG TTATATTTAA CGGTACCGAA AAGAGAAATC AGCTTAATAT TGCAGAAGTA
ACCTTAACTA TAAGCAATGA AAAGGGCCTC TTGAATTTGG ATTTAAGCGA AATAGCTATA
AAGAGGCGTC TTTACCGTTC AGGGGAAAGC GAATATTTTA TCAATAACCA GCCGGCAAAG
CTGCGTGAAA TTAGAGAACT TTTTTGGGAC ACAGGTGTCG GAAAGGCTGC ATATTCCGTT
ATGGAGCAGG GCAAAATCGA CCAGATCCTT TCGAGTAAGC CTGAAGAAAG GCGCTATCTT
TTTGAAGAAG CTGCCGGTAT AACGAAATTT AAGGTAAAAA GACAGGATGC GGAAAGAAAG
CTCGAAAAAA CCCAAGAAAA TATGAAACAG ATTGAAGCTG CTTTGGCCGA GGTCCGAAGA
TCCTATGATA CCTTAAAAAT TCAGTCTGAA CAAACAATCA AATACCGTGA GCTAAAAGAT
GCCGTTTTTG AACATGAAAG AGATATTCAG CTTTTACGCT TAAAAAGTTT TGTAGACGGT
CTTGCCGCAA AAAAACAGAG CTTAAAAGAA GCCTCCGAAA AAAGAGATTC CATACAGGAG
CAAATTGACG GTATTCACGG GCTCCTTTCG GAAAATATGG ATATCGTAAA TGAAATGGAA
GAGAAGTTTA ATGCTTACCG AACAAAGGTT CTAAACCTGG CCATAGAACA AAAAGGTAAG
CAGGAGCAGG TTCAAATTTA CAATAAACGC CGTTCCGAGC TTAAGCTAAA GCTTAACCAA
CTGGAGGCTA AGACCTCTTC AACCAAGGAA AATATTGAAA GCCTTGAAGA CGATATTTCC
GAAAAAAATG CCGATGTTTT TGAGTTTAAA AAACAGGTTT CTGCAATAGA AAAAAATGCC
GAAGACTTTG AAAAAAACAT AGACTTGGCA AGCCATAAGA TTACTTCAAA CAAGGAAGAA
GTAAAAAGGC TTGAAGACGA TATAAAAAGG CTTGACGATA TGAGAGGGGA TATGGAGCTT
GAATTAAAGT CCATAACCGA AGATATCGTT ACCGAACTTG ATAAAAATTT AAGATCGGCA
GGTTATTCCT CGGCAAATCG CTTGGAAGCC GAAAAAGACT TGGATGGTGC TTTAAACCGG
TTAAAGGTTT TAATTACGGG AAAAAAGGCT ATATTTTCCG ACTTTGCCTC GATAGAAAAT
CACTCTGCAG ATGATGTAAA AAAATTCGCA GAAGACTCCG TTCAAAGTTT TTCTTCACTT
TTATCCATAA GCGATGAAGT TCAAAATGCC CTTGAAAAAT ATAAAAAATC TTCGGCAGGT
TTTATTGATG ACTTTTTGGC TCCTGAAGGT ATTATTACCA AAAAAAGAGC AGTCGATGCC
GCTATCTTGG AAAACAGGCA ATCTATCGAA AATAACCGTA CAAAAATTGC CGCTCTGATA
GAAGAAAATA ACGAGCTTTC CATCAAGATA AACGACTATC GCAAAACCCT TGAAGATTTG
CGTGTAAACA GAGCGAAGGT AGATGCTCAG GCAAAAAATG CAGAAGATCA GGTTAAACTT
TTAGAACGTC AGCTTTCTTC AGAGAAAAAA ATACTTCATG ACCTTGAAAA CGAATTTTTT
ACCGAAGAAA AACAATTAAA GCAAACGGAA GAAGATATTT CGGAACTTGA AGGCGAGATA
AATTCTTTGG AATATGAGGG AAGAAAGATA AGTGCCGAGC TTGAAAAACT TGAAAATGAA
ATCTCGATAA AAAACTCCGA CCTTGCCAGT AAGAGAGGGA AGGTTGACAA GCTTAACGCA
GAGCTTTCAA AAGCAAACTC TCTTTTGGAA AAATTCCATT TGGATCTTGC AGGGATTGAA
GCCGATATCC GTAACACAAA AGAAAATTTT AGAGAAAAGC ATTCCCGAGA GCTTATGGAG
TTTGAGGAGA GGATGTTTAC TATTACCTCA TCTGTAAATG ATCTTAGGGA CAGCCTTTCT
TCAATTAAGC AAAAACTTGA TTCTTTGGGA CGGGTAAACT TTATGGCTCC CGAAGAATTT
GAAAGCGTTA AAGAACGCTA TGAATTTTTA ACTAAACATA TAAGCGATCT TGATAAGGCC
CGTGCAGATT TGCAGAGGAT TACGGATGAG ATTACGGCCG AATCCACCGA GCTTTTTTTG
GACACCTACA ATAAGATTAA AAAGAATTTT CATAATATGT TTAGGAGACT TTTTGGCGGC
GGAAGGGCTG AAATACGCTT AACCGATCCG AAAAATGTGC TTGAATCGGG AATAGAAATT
TTTGCACAGC CTCCGGGGAA AAAACTTGAA AATATCAGTC TGTTATCGGG CGGAGAAAAA
TCCATGACGG CGGTAGCTCT TTTATTTGCA ACCTATATGG TTAAGCCTTC TCCGTTCTGT
CTTCTTGACG AAATTGACGC GGCCCTCGAT GAGCAAAATG TTACCCGCTT TGTTACTACG
CTTCGTGAAT TTGCAAATGT AAGCCAGTAC ATTGTTATTA CTCATAATAA AAAGACTGTT
TTGGGTGCAA ATGCCATGCT GGGTGTTACC ATGGAAGAAT CCGGTGTTTC AAAGGTTATA
GCCATAAGGC TGGATAATGA AACGGAGCTT GAATCAAAAA CTATAGACTT GGTTAATGAG
CCCTTTGTAG AAGAAGATGT TGAGCCTGAG GAGGGGGTTT ATATTCCGCC TCATCCGCCT
AAAAGGATAA AAACCGTAAA CGATGAGGAG GAAATTTCAG AAAATGATAG ACCTCAAGAG
TAA
 
Protein sequence
MFLKNLEIFG FKSFPDRVKI EFADGITALL GPNGCGKSNV VDAVKWVLGE QSSRTLRADK 
MEDVIFNGTE KRNQLNIAEV TLTISNEKGL LNLDLSEIAI KRRLYRSGES EYFINNQPAK
LREIRELFWD TGVGKAAYSV MEQGKIDQIL SSKPEERRYL FEEAAGITKF KVKRQDAERK
LEKTQENMKQ IEAALAEVRR SYDTLKIQSE QTIKYRELKD AVFEHERDIQ LLRLKSFVDG
LAAKKQSLKE ASEKRDSIQE QIDGIHGLLS ENMDIVNEME EKFNAYRTKV LNLAIEQKGK
QEQVQIYNKR RSELKLKLNQ LEAKTSSTKE NIESLEDDIS EKNADVFEFK KQVSAIEKNA
EDFEKNIDLA SHKITSNKEE VKRLEDDIKR LDDMRGDMEL ELKSITEDIV TELDKNLRSA
GYSSANRLEA EKDLDGALNR LKVLITGKKA IFSDFASIEN HSADDVKKFA EDSVQSFSSL
LSISDEVQNA LEKYKKSSAG FIDDFLAPEG IITKKRAVDA AILENRQSIE NNRTKIAALI
EENNELSIKI NDYRKTLEDL RVNRAKVDAQ AKNAEDQVKL LERQLSSEKK ILHDLENEFF
TEEKQLKQTE EDISELEGEI NSLEYEGRKI SAELEKLENE ISIKNSDLAS KRGKVDKLNA
ELSKANSLLE KFHLDLAGIE ADIRNTKENF REKHSRELME FEERMFTITS SVNDLRDSLS
SIKQKLDSLG RVNFMAPEEF ESVKERYEFL TKHISDLDKA RADLQRITDE ITAESTELFL
DTYNKIKKNF HNMFRRLFGG GRAEIRLTDP KNVLESGIEI FAQPPGKKLE NISLLSGGEK
SMTAVALLFA TYMVKPSPFC LLDEIDAALD EQNVTRFVTT LREFANVSQY IVITHNKKTV
LGANAMLGVT MEESGVSKVI AIRLDNETEL ESKTIDLVNE PFVEEDVEPE EGVYIPPHPP
KRIKTVNDEE EISENDRPQE