Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1496 |
Symbol | |
ID | 2739897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1540425 |
End bp | 1543367 |
Gene Length | 2943 bp |
Protein Length | 980 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160375 |
Product | chromosome partition protein SmC, putative |
Protein accession | NP_972102 |
Protein GI | 42527004 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTTA AAAATCTTGA AATTTTCGGA TTTAAGTCCT TTCCCGATAG AGTAAAAATT GAATTTGCAG ATGGTATAAC AGCCCTCCTG GGACCCAACG GCTGCGGAAA AAGTAATGTA GTGGATGCAG TAAAATGGGT ATTGGGGGAA CAATCGTCCC GTACTTTACG GGCCGACAAA ATGGAAGACG TTATATTTAA CGGTACCGAA AAGAGAAATC AGCTTAATAT TGCAGAAGTA ACCTTAACTA TAAGCAATGA AAAGGGCCTC TTGAATTTGG ATTTAAGCGA AATAGCTATA AAGAGGCGTC TTTACCGTTC AGGGGAAAGC GAATATTTTA TCAATAACCA GCCGGCAAAG CTGCGTGAAA TTAGAGAACT TTTTTGGGAC ACAGGTGTCG GAAAGGCTGC ATATTCCGTT ATGGAGCAGG GCAAAATCGA CCAGATCCTT TCGAGTAAGC CTGAAGAAAG GCGCTATCTT TTTGAAGAAG CTGCCGGTAT AACGAAATTT AAGGTAAAAA GACAGGATGC GGAAAGAAAG CTCGAAAAAA CCCAAGAAAA TATGAAACAG ATTGAAGCTG CTTTGGCCGA GGTCCGAAGA TCCTATGATA CCTTAAAAAT TCAGTCTGAA CAAACAATCA AATACCGTGA GCTAAAAGAT GCCGTTTTTG AACATGAAAG AGATATTCAG CTTTTACGCT TAAAAAGTTT TGTAGACGGT CTTGCCGCAA AAAAACAGAG CTTAAAAGAA GCCTCCGAAA AAAGAGATTC CATACAGGAG CAAATTGACG GTATTCACGG GCTCCTTTCG GAAAATATGG ATATCGTAAA TGAAATGGAA GAGAAGTTTA ATGCTTACCG AACAAAGGTT CTAAACCTGG CCATAGAACA AAAAGGTAAG CAGGAGCAGG TTCAAATTTA CAATAAACGC CGTTCCGAGC TTAAGCTAAA GCTTAACCAA CTGGAGGCTA AGACCTCTTC AACCAAGGAA AATATTGAAA GCCTTGAAGA CGATATTTCC GAAAAAAATG CCGATGTTTT TGAGTTTAAA AAACAGGTTT CTGCAATAGA AAAAAATGCC GAAGACTTTG AAAAAAACAT AGACTTGGCA AGCCATAAGA TTACTTCAAA CAAGGAAGAA GTAAAAAGGC TTGAAGACGA TATAAAAAGG CTTGACGATA TGAGAGGGGA TATGGAGCTT GAATTAAAGT CCATAACCGA AGATATCGTT ACCGAACTTG ATAAAAATTT AAGATCGGCA GGTTATTCCT CGGCAAATCG CTTGGAAGCC GAAAAAGACT TGGATGGTGC TTTAAACCGG TTAAAGGTTT TAATTACGGG AAAAAAGGCT ATATTTTCCG ACTTTGCCTC GATAGAAAAT CACTCTGCAG ATGATGTAAA AAAATTCGCA GAAGACTCCG TTCAAAGTTT TTCTTCACTT TTATCCATAA GCGATGAAGT TCAAAATGCC CTTGAAAAAT ATAAAAAATC TTCGGCAGGT TTTATTGATG ACTTTTTGGC TCCTGAAGGT ATTATTACCA AAAAAAGAGC AGTCGATGCC GCTATCTTGG AAAACAGGCA ATCTATCGAA AATAACCGTA CAAAAATTGC CGCTCTGATA GAAGAAAATA ACGAGCTTTC CATCAAGATA AACGACTATC GCAAAACCCT TGAAGATTTG CGTGTAAACA GAGCGAAGGT AGATGCTCAG GCAAAAAATG CAGAAGATCA GGTTAAACTT TTAGAACGTC AGCTTTCTTC AGAGAAAAAA ATACTTCATG ACCTTGAAAA CGAATTTTTT ACCGAAGAAA AACAATTAAA GCAAACGGAA GAAGATATTT CGGAACTTGA AGGCGAGATA AATTCTTTGG AATATGAGGG AAGAAAGATA AGTGCCGAGC TTGAAAAACT TGAAAATGAA ATCTCGATAA AAAACTCCGA CCTTGCCAGT AAGAGAGGGA AGGTTGACAA GCTTAACGCA GAGCTTTCAA AAGCAAACTC TCTTTTGGAA AAATTCCATT TGGATCTTGC AGGGATTGAA GCCGATATCC GTAACACAAA AGAAAATTTT AGAGAAAAGC ATTCCCGAGA GCTTATGGAG TTTGAGGAGA GGATGTTTAC TATTACCTCA TCTGTAAATG ATCTTAGGGA CAGCCTTTCT TCAATTAAGC AAAAACTTGA TTCTTTGGGA CGGGTAAACT TTATGGCTCC CGAAGAATTT GAAAGCGTTA AAGAACGCTA TGAATTTTTA ACTAAACATA TAAGCGATCT TGATAAGGCC CGTGCAGATT TGCAGAGGAT TACGGATGAG ATTACGGCCG AATCCACCGA GCTTTTTTTG GACACCTACA ATAAGATTAA AAAGAATTTT CATAATATGT TTAGGAGACT TTTTGGCGGC GGAAGGGCTG AAATACGCTT AACCGATCCG AAAAATGTGC TTGAATCGGG AATAGAAATT TTTGCACAGC CTCCGGGGAA AAAACTTGAA AATATCAGTC TGTTATCGGG CGGAGAAAAA TCCATGACGG CGGTAGCTCT TTTATTTGCA ACCTATATGG TTAAGCCTTC TCCGTTCTGT CTTCTTGACG AAATTGACGC GGCCCTCGAT GAGCAAAATG TTACCCGCTT TGTTACTACG CTTCGTGAAT TTGCAAATGT AAGCCAGTAC ATTGTTATTA CTCATAATAA AAAGACTGTT TTGGGTGCAA ATGCCATGCT GGGTGTTACC ATGGAAGAAT CCGGTGTTTC AAAGGTTATA GCCATAAGGC TGGATAATGA AACGGAGCTT GAATCAAAAA CTATAGACTT GGTTAATGAG CCCTTTGTAG AAGAAGATGT TGAGCCTGAG GAGGGGGTTT ATATTCCGCC TCATCCGCCT AAAAGGATAA AAACCGTAAA CGATGAGGAG GAAATTTCAG AAAATGATAG ACCTCAAGAG TAA
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Protein sequence | MFLKNLEIFG FKSFPDRVKI EFADGITALL GPNGCGKSNV VDAVKWVLGE QSSRTLRADK MEDVIFNGTE KRNQLNIAEV TLTISNEKGL LNLDLSEIAI KRRLYRSGES EYFINNQPAK LREIRELFWD TGVGKAAYSV MEQGKIDQIL SSKPEERRYL FEEAAGITKF KVKRQDAERK LEKTQENMKQ IEAALAEVRR SYDTLKIQSE QTIKYRELKD AVFEHERDIQ LLRLKSFVDG LAAKKQSLKE ASEKRDSIQE QIDGIHGLLS ENMDIVNEME EKFNAYRTKV LNLAIEQKGK QEQVQIYNKR RSELKLKLNQ LEAKTSSTKE NIESLEDDIS EKNADVFEFK KQVSAIEKNA EDFEKNIDLA SHKITSNKEE VKRLEDDIKR LDDMRGDMEL ELKSITEDIV TELDKNLRSA GYSSANRLEA EKDLDGALNR LKVLITGKKA IFSDFASIEN HSADDVKKFA EDSVQSFSSL LSISDEVQNA LEKYKKSSAG FIDDFLAPEG IITKKRAVDA AILENRQSIE NNRTKIAALI EENNELSIKI NDYRKTLEDL RVNRAKVDAQ AKNAEDQVKL LERQLSSEKK ILHDLENEFF TEEKQLKQTE EDISELEGEI NSLEYEGRKI SAELEKLENE ISIKNSDLAS KRGKVDKLNA ELSKANSLLE KFHLDLAGIE ADIRNTKENF REKHSRELME FEERMFTITS SVNDLRDSLS SIKQKLDSLG RVNFMAPEEF ESVKERYEFL TKHISDLDKA RADLQRITDE ITAESTELFL DTYNKIKKNF HNMFRRLFGG GRAEIRLTDP KNVLESGIEI FAQPPGKKLE NISLLSGGEK SMTAVALLFA TYMVKPSPFC LLDEIDAALD EQNVTRFVTT LREFANVSQY IVITHNKKTV LGANAMLGVT MEESGVSKVI AIRLDNETEL ESKTIDLVNE PFVEEDVEPE EGVYIPPHPP KRIKTVNDEE EISENDRPQE
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