| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1477 |
|---|
| Symbol | |
|---|
| ID | 2741592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1522563 |
|---|
| End bp | 1523423 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637160356 |
|---|
| Product | flagellar filament core protein |
|---|
| Protein accession | NP_972083 |
|---|
| Protein GI | 42526985 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCA ATCACAACAT GAGTGCGATG TTCGCACAGA GAACGCAGGG TGTTACCAAT
GTACGCATCG GTAAAGACAT CGAAAAACTT TCATCCGGTT TACGCATTAA CCGTGCAGGC
GATGACGCTT CCGGCCTTGC AGTTTCCGAG AAAATGAGAA GCCAGATTCG AGGTTTAAAC
CAAGCTTCTG CAAACGCTTC AAACGGTATT AACTTTATCC AAGTAGCCGA AGCTTTCTTG
CAGGAAACAA CCGACATCAT GCAGAGAATC CGCGAACTCG CTGTTCAGGC TTCAAACGGT
ATCTATTCTG CCGAAGACAG AATGCAGATT CAGGTCGAAG TTTCGCAGCT CGTTGCCGAA
GTTGACCGCA TTGCAAGTTC AGCCCAATTT AACGGTATGA ACATGCTTAC AGGCCGCTTT
GCACGCGAAA CCGGTGAAAA TGTTGTTACC GGTTCTATGT GGTTCCACAT CGGTGCCAAC
ATGGATCAGA GAATGCGCGT TTACATTGGA ACAATGTCAG CTGCAGCTCT CGGTATCCGA
GATATCGGTG ATGAAAAAAT CATGACAATC GAAACAGCCG ATGCTGCAAA TAGGAGCATT
GGAACAATCG ATGAGGGTCT TAAAAAGATC AACAAGCAAA GAGCTGACCT TGGCGGTTAC
CAGAACAGAA TGGAGTTGAC GGTTGTCGGT ATCGACATTG CTGCCGAAAA CCTCCAAGCT
GCTGAGTCAA GAATCCGAGA TGCAGACATG GCAAAACAGA TGGTAGAATA TACAAAGAAC
CAAATTTTGT CGAATACCGG TATTGCAATG CTCGCTCAGG CTAATAACAA TAGCCAGCTT
GTAATGTCTC TTTTAAGGTA A
|
|---|
| Protein sequence | MIINHNMSAM FAQRTQGVTN VRIGKDIEKL SSGLRINRAG DDASGLAVSE KMRSQIRGLN
QASANASNGI NFIQVAEAFL QETTDIMQRI RELAVQASNG IYSAEDRMQI QVEVSQLVAE
VDRIASSAQF NGMNMLTGRF ARETGENVVT GSMWFHIGAN MDQRMRVYIG TMSAAALGIR
DIGDEKIMTI ETADAANRSI GTIDEGLKKI NKQRADLGGY QNRMELTVVG IDIAAENLQA
AESRIRDADM AKQMVEYTKN QILSNTGIAM LAQANNNSQL VMSLLR
|
|---|
| |