| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1472 |
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| Symbol | fliD |
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| ID | 2741587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1518847 |
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| End bp | 1520805 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637160351 |
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| Product | flagellar hook-associated protein FliD |
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| Protein accession | NP_972078 |
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| Protein GI | 42526980 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT TAAGTATACC GGGAGTCAAT AATACATACG AAAAGCTCGT TGAAGCTTTG
ATGAAAAAGG AAAGAATTCC TCGTGACAGA GAAGCCGAAA AACTCGAGCG TCTAAAATTG
CAGGATGATT CCTGGAGGCA GGTAAATAAA TTTTCTCTTG AAGTACGAAA TGCTGCGAGA
GACCTATATT CTTTTAATAA TCCCTTTGTA GAAAAAATAG CAGAATCCTC AAATGAAAGA
TCCTTTACCG CAACAGCTTC AAGAGGAGCT AAGGATCAAA ATGTAAAACT TAATATAGTT
CAAGTTGCAG AATCCGATAA ATTTTTAAGT ACCGAAATCA ATAATGACCT TCAAATAAAA
AAAGGTATAT ATACTTTTAA GGTAGGAGAA AAAACCATAT CCGTAAACTG GAAGGGCGGA
AAATATAAGG GTTTTATAGA CCTTGTAAAC TCAAGAGCAA AAGAAATTTT AAATATAAGC
GAAATAAAAA TAACCCCGGA TACGAAGTCC TTACTTTTTT CATCCAACAT AACAGGAGCA
AAAAACAGAT TGGAGTTTGC AGATGATGCC CTACCCTTTG CCATTGAAAT GGGACTCATC
AAAAAGAATG ATACATCTGC CATAAAAACT TCAGTTTCCT CCATTGAAAC TAAGCCCGAG
ACCTCTCAAA AAATAGATTT TTCCGAAACT GTAAGAGCCA AGGGGCAATA TGTCATGGAA
CTTACGGTTT CAATTAAGGA ACCGTCAAAA GAAACCGTAA AAAAAGAAGA AACGGGCGAA
AAAATCTATG AGCAAATAGG CTCAATCGCA TACAGAGGTA TTGTAATACA AAATGAACCT
TCAAACGACG GCCTTGAAAA AACGAAAATG GAACCCAAGG AAACCTCAGG TCCAAAAGTT
GATATGAATA TTTTAGCCTT AGAATCGACA AGAGGAGTAC TTATTCCCCT ACCCCCTCTT
TCGGAAAATG CCGAAAAACA GACAATTACG ATTCCTTTGG CTGAATACGG AGACGTAAAA
GCTCTTGCAA TAAACAATAA TAATTCAGAA AAGGCCGTCT TTATAGAAAA TATTAAAATA
TTTGATCCTA AGGCAGCCGG AGACTATGTT CCCGTAAACC CGGTTTCAAC GGCACAGGAT
GCGATAATCA ATTTTGAGGG CATTCAAATT AAAAGAGAAA AAAACGATAT CGACGATTTA
GTGCCTAATG TAACCATTCA TGCCCATGAG TCTTCGGAAA AGCAGGAAAA ACTTACCATA
AAACCGGATG TAGATGCCGT CAAAAATGCG ATCATCGAGT TGGTAGCCAA ATATAACCGT
GTTTTTGCTC AAATAAATAT TTTAACGCAA AATAAGCCCG AAATCATAGA AGAACTGACC
TATCTTTCAG AATCGGAAGT TGAAGATGCT CAAAAAAAAT TAGGTTTAAT GTATAGCGAC
TCTACTCTGA TGACATTAAA ATCCAATTTA AGGCAAACAA TAAATACCGC CTATAAACCT
GCAGATGATT CTAAAATATT TATGTTGGCT CAACTTGGAA TTTCCACAAA ATCCGATTCT
TCGGGCGGCA TAGACATGTC GCGCCTTCGC GGATATCTGG AAATTGACGA AAAAAAGCTT
GATGAAGTCT TAAAGAACAA TATGGAAGAG GTAAAACTGT TTTTCGGCTT TGATTCCGAC
GGAGATATTT TAATAGATTC AGGCCTTGCT CATGCAATGT ATGAATACAT AAACCCGTAC
ACACAAAGAG GCGGTATCTT CGGCATAAAA ACCGATTCTT TAAAACTAAA GATGGATTCT
TCCCAAAAAA GAATAGAAAA CTACGACAAA AAACTTGCCG AAAAAGAACT GGCGCTTAAA
AAGAAATACG GAATAATGGA CGGTACCTTA AAAAGTTTAC AAAAACAGTC CCAAACGATG
GATAATTTTA ACAAGCAACT TCAAAATCAA AATAAATAA
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| Protein sequence | MSDLSIPGVN NTYEKLVEAL MKKERIPRDR EAEKLERLKL QDDSWRQVNK FSLEVRNAAR
DLYSFNNPFV EKIAESSNER SFTATASRGA KDQNVKLNIV QVAESDKFLS TEINNDLQIK
KGIYTFKVGE KTISVNWKGG KYKGFIDLVN SRAKEILNIS EIKITPDTKS LLFSSNITGA
KNRLEFADDA LPFAIEMGLI KKNDTSAIKT SVSSIETKPE TSQKIDFSET VRAKGQYVME
LTVSIKEPSK ETVKKEETGE KIYEQIGSIA YRGIVIQNEP SNDGLEKTKM EPKETSGPKV
DMNILALEST RGVLIPLPPL SENAEKQTIT IPLAEYGDVK ALAINNNNSE KAVFIENIKI
FDPKAAGDYV PVNPVSTAQD AIINFEGIQI KREKNDIDDL VPNVTIHAHE SSEKQEKLTI
KPDVDAVKNA IIELVAKYNR VFAQINILTQ NKPEIIEELT YLSESEVEDA QKKLGLMYSD
STLMTLKSNL RQTINTAYKP ADDSKIFMLA QLGISTKSDS SGGIDMSRLR GYLEIDEKKL
DEVLKNNMEE VKLFFGFDSD GDILIDSGLA HAMYEYINPY TQRGGIFGIK TDSLKLKMDS
SQKRIENYDK KLAEKELALK KKYGIMDGTL KSLQKQSQTM DNFNKQLQNQ NK
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