Gene TDE1464 details

Gene Information

• Locus tag: TDE1464
• Symbol: smpB
• ID: 2741579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1513166
• End bp: 1513630
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637160343
• Product: SsrA-binding protein
• Protein accession: NP_972070
• Protein GI: 42526972
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAAAA CACCTGTAAA AATCATAGCA AAAAACAAAA AGGCTTTTTT TAATTATACC 
GTTGAAGAAA AAATAGAATG CGGCCTAGTC TTAAAAGGTA CGGAAGTCAA ATCTCTCAGA 
GAAGGAAGGA TATCTTTTCC CGATGCCTTT GCCGAAATTA AAGATAATGA AGTATGGGTT 
AAAAATTTTC ATATTTCGGA GTATATTTAC TCTTCCGTTT TTAATCATGA TCCCGAAAGG 
CCAAAAAAAC TCCTTTTAAA AAAGGATGAA ATAAAAAGAT TAAAACGAAA GGTGGAGGAA 
AAAGGTTATA CCCTTGTTCC CTTGGAATTT TACTTTAAAA ACGGTATCGT TAAGGTACTC 
TTAGGTGTTT GTAAGGGTAA AAAGACCTTT GATAAGCGGG CAGACATAAA AGATAGAGAC 
ATAAAAAGAG ATATGCAAAG GGAGATAAAA ATAAGGGGTA AGTAA 

 

Protein sequence

MEKTPVKIIA KNKKAFFNYT VEEKIECGLV LKGTEVKSLR EGRISFPDAF AEIKDNEVWV 
KNFHISEYIY SSVFNHDPER PKKLLLKKDE IKRLKRKVEE KGYTLVPLEF YFKNGIVKVL 
LGVCKGKKTF DKRADIKDRD IKRDMQREIK IRGK